Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0970
         (392 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.43 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   0.75 
DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.        24   1.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.0  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    22   7.0  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    22   7.0  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    22   9.2  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.43
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 83   GSERPQDAAENADFSFSGTD*C*NSGN 3
            GSE+P++A E +  + SGTD   +SG+
Sbjct: 1348 GSEKPKNAIEPSQEAVSGTDNANDSGD 1374



 Score = 25.4 bits (53), Expect = 0.75
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 209 QSLRTRSWTSRQQLPKKIPVYLT 277
           QS+RT  W+S  + P K  +YLT
Sbjct: 53  QSMRTNRWSSHPEAPGK-AIYLT 74


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 0.75
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 280 LRSRGQPCSGVRRPTRHQQITVNYSNDTCESK 375
           L +   P  G RRPT++QQI   +++D  E++
Sbjct: 16  LANEFNPNRGRRRPTKNQQIYGVWADDDSENE 47


>DQ974167-1|ABJ52807.1|  434|Anopheles gambiae serpin 8 protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
 Frame = -2

Query: 325 ELGDVLQNTADLGCVVRQVDRDLLRKLLTAGPTSRP-KRLIWRLDLTSPIVIA---APMS 158
           EL D   N      +V       L  L+T G + R    L+  LD+     I     P +
Sbjct: 67  ELVDYNPNVTTTNIIVSPFSAWNLLTLITEGASGRTLDELLVALDVQQQEQIRNYYKPFA 126

Query: 157 LTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPS 35
            +  L  R+ +  A+    +  + P +KD  + L    SPS
Sbjct: 127 QSFSLLDRDVQLAAAQYVITDENRPVSKDFESALDNFYSPS 167


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 125  SGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD 24
            S ++ ND +K  +SGS + Q   E   F F   D
Sbjct: 1270 SVTIKNDPMK--TSGSTQQQQQMERQQFGFGNND 1301


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 268 LPDGLRSRGQPCSGVRR 318
           LP   RSR +P  GVRR
Sbjct: 3   LPRSPRSRTRPARGVRR 19



 Score = 22.2 bits (45), Expect = 7.0
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = -2

Query: 319 GDVLQNTADLGCVVRQVDRDLLRKLL--TAGPTSRPKRLIWRLDLTSP-IVIAAPMSLTM 149
           GDV+Q +  +      VD D  ++ +  TA P +    ++ R  L +  IV AAP++  +
Sbjct: 46  GDVVQGSYSV------VDPDGTKRTVDYTADPHNGFNAVVRREPLAAKTIVAAAPVATKV 99

Query: 148 MLSARETEAVASATTFSRASPPEAK 74
           +       A   A T S A+P   K
Sbjct: 100 IAQPAVAYAAPVAKTISYAAPVATK 124


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -1

Query: 323 VGRRTPEHG*PRLRSP--SGRQGS 258
           VG++ P  G P LR+P  +G  GS
Sbjct: 20  VGKQLPASGIPTLRAPMAAGNAGS 43


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 201 LQINLFGREVGPAVNNFLRRSLST 272
           ++++ F   + P +NN +RRS ++
Sbjct: 541 IEMDTFRVNLTPGINNIIRRSANS 564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,625
Number of Sequences: 2352
Number of extensions: 6924
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)