Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0969
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225, w...    36   1.2  
UniRef50_A2FU42 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  

>UniRef50_A7QXI3 Cluster: Chromosome undetermined scaffold_225,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_225, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 751

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 16/60 (26%), Positives = 31/60 (51%)
 Frame = +2

Query: 503 KQQILDVINNITRMPILCDGPKEDMEPLLLPLLAYIAERKNDYSIDLSSCDLVKYECLVT 682
           K ++ ++ + + R  +  D PKED  P   P+  Y+  RKN   + L    + K +C+++
Sbjct: 243 KVELFEINSKLQRPELHDDRPKEDRSPSPEPVYDYLGNRKNTREVRLREKLIKKRQCIIS 302


>UniRef50_A2FU42 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 731

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +2

Query: 476 VQILQRTINKQQILDVINNITRMPILCDGPKEDMEPLLLPLLAYIAERKNDYSIDLSSCD 655
           + ++ +T N  +I+ VI  +T   +L     ED+E LL   LA IA+  ND   D+S  +
Sbjct: 281 IDLIMKTPNPAEIVPVITGLTHRTVLF--LHEDIEMLLF--LAKIAKNNNDMQFDISLSE 336

Query: 656 LVK 664
            +K
Sbjct: 337 NIK 339


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,048,031
Number of Sequences: 1657284
Number of extensions: 9967432
Number of successful extensions: 19126
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19123
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)