Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0967
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 40 0.001
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.038
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.087
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.087
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.087
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.15
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 32 0.35
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 32 0.35
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.61
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.81
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 31 1.1
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.1
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 30 1.9
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 29 2.5
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 29 3.3
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 28 5.7
SB_41410| Best HMM Match : 7tm_1 (HMM E-Value=0.00049) 28 7.5
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_47586| Best HMM Match : NAD_binding_3 (HMM E-Value=2) 27 9.9
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.9
SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1) 27 9.9
SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1) 27 9.9
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD 425
C Q P G L GWG TV V L +L++ + NK C + ++ +
Sbjct: 100 CLPQDDTEFPAGKMCYLTGWGETVLDSGVFSPTLKQLKVPLVNKSVCNSN-NSYSGIIHE 158
Query: 426 NKFCAGLVRAGGRDYDNTDLGAP 494
CAG GG+D D G P
Sbjct: 159 QFMCAG-YNQGGQDGCLGDSGGP 180
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 273 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 443
P G + GWG T + SD L + ++ + +++ C Y G ++ + CAG
Sbjct: 662 PDGAGCYVTGWGRTAENEGYSD-VLREAQVRLVSRDTCNASYSG---IINERYICAG 714
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +3
Query: 300 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 479
GWG +G + L + ++ + +++ C Q DR +T+N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 480 DLGAP 494
D G P
Sbjct: 409 DSGGP 413
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 273 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 443
P G + GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 415 PAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 471
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 273 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 443
P G + GWG+T GS S L ++ L + N C Y R +T CAG
Sbjct: 664 PAGTLCYVTGWGSTNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG 720
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD 425
C V P G + GWGT GGS + L++ + + + C Y G ++
Sbjct: 742 CMPNDTVHFPNGTMCYITGWGTLSSGGSQPEA-LNQAVVPLRTRSECERSYPGK---ISA 797
Query: 426 NKFCAGLVRAGGRDYDNTDLGAPAFFQ 506
+ CAG GG D D G P Q
Sbjct: 798 DMICAGNPE-GGVDTCQGDSGGPLVCQ 823
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 36.3 bits (80), Expect = 0.021
Identities = 27/84 (32%), Positives = 37/84 (44%)
Frame = +3
Query: 252 YQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNK 431
YQ+ +V P+ V +LGWG T L + + V N C++ Y+ VT N
Sbjct: 1286 YQRRLVKPRAKGV-MLGWGVTEN--KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNM 1342
Query: 432 FCAGLVRAGGRDYDNTDLGAPAFF 503
CAG + RD N D G F
Sbjct: 1343 LCAG-YKNKSRDSCNRDSGGGFVF 1365
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.5 bits (78), Expect = 0.038
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 294 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 473
+ GWG+T+ G+ S L + L + + +C+ +Y G V + CAG R+G
Sbjct: 207 ITGWGSTIGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGC 262
Query: 474 NTDLGAP 494
N D G P
Sbjct: 263 NGDSGGP 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWILQ 607
L G VS+GK + Y V ++S+T+WI Q
Sbjct: 280 LHGAVSYGKLHCPTTYYTVFARVASYTDWIKQ 311
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +3
Query: 300 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 479
GWG LH+ + + + + CR+ + D +VT N FCAG + D
Sbjct: 251 GWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQG 308
Query: 480 DLGAP 494
D G P
Sbjct: 309 DSGGP 313
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = +1
Query: 154 HPEFSEENYDKDVSIVRVTHAIHFGPNIQQGAIINKVS*YPRV 282
HP +S ++YD D++++R+ + F ++ + + S Y ++
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQL 241
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 294 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 473
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 474 NTDLGAP 494
D G P
Sbjct: 133 QGDSGGP 139
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 294 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 473
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 474 NTDLGAP 494
D G P
Sbjct: 477 QGDSGGP 483
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/90 (17%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 171
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 172 ENYDKDVSIVRVTHAIHFGPNIQQGAIINK 261
D++++ ++ + Q ++ +K
Sbjct: 152 PQLSNDIALIELSSPVPLSDRGHQVSVGSK 181
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGN-LHKLELIVTNKENCREQYKGHDRVVT 422
C +QG + G GWG TV G S + L + L V N++ C+ Y D +T
Sbjct: 465 CLPRQGEELSDGKICYATGWGLTVGGDWKSQSDVLKQTPLPVVNRQECQTDY--DDIPIT 522
Query: 423 DNKFCAG 443
C G
Sbjct: 523 TAMMCTG 529
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.3 bits (70), Expect = 0.35
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 156 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGE 16
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ +
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDD 262
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +3
Query: 279 GIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAG 458
G + ++GWG TV GG ++ L + L V +C ++ RV + CAG RA
Sbjct: 87 GAYTVVVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAA 145
Query: 459 G 461
G
Sbjct: 146 G 146
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +3
Query: 273 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAG 443
P G + GWG T + SD L + ++ + +++ C Y G ++ + CAG
Sbjct: 377 PDGAGCYVTGWGRTAENEGYSD-VLREAQVRLVSRDTCNASYSG---IINERYICAG 429
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.1 bits (67), Expect = 0.81
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +3
Query: 252 YQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV----- 416
Y V I + F+ GWG + G ++ L + +L V + C E++ G +
Sbjct: 146 YMDHVEIGKDCFIT--GWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENG 202
Query: 417 ---VTDNKFCAGLVRAGGRDYDNTDLGAP 494
VT+ CAG G++ N D G P
Sbjct: 203 TWRVTETMLCAGDAGKTGKNGCNGDSGGP 231
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/83 (24%), Positives = 30/83 (36%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD 425
C G V P G L GWG V L + + + + E+C+ +Y + +
Sbjct: 54 CLPSPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKY--GSGIYSY 111
Query: 426 NKFCAGLVRAGGRDYDNTDLGAP 494
CAG + D G P
Sbjct: 112 THLCAGEAKPNAAGACQGDSGGP 134
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
L G+VSFG N V T +S++ +WI
Sbjct: 145 LYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 498 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 409
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 300 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 479
GWG + G LH+ + + +++ C++ Y V+ CAG AGG D
Sbjct: 238 GWGHLQEAGH-GPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQG 295
Query: 480 DLGAP 494
D G P
Sbjct: 296 DSGGP 300
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +3
Query: 294 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 473
+ GWG S L + L + + ENCR +Y V + CAG R+
Sbjct: 561 ITGWGAINGDTQQSPDILQQAMLPIASHENCRRKY---GDVSSTAHLCAGEARSDAAGGC 617
Query: 474 NTDLGAP 494
N D G P
Sbjct: 618 NGDSGGP 624
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD 425
C G G + GWG TV GGS + G L + L V +C+ V +
Sbjct: 141 CLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQAMLPVAGDSDCQRTNGRLVPVDSR 199
Query: 426 NKFCAGLVRAGGRDYDN 476
+ CAG GG D+
Sbjct: 200 SMICAGGQGKGGCQGDS 216
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = +3
Query: 246 CYYQQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGH 407
CY Q ++ + VD + W G +D L + +I NK N H
Sbjct: 34 CYLQMEIIFLHALEVDDIAWTEEKVGKRSADAKLTNILIITNNKNNNNNNNNHH 87
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEISYVHFAV 150
C+G ++ H ++ A C H G+++ I+ G S S E+ Y FAV
Sbjct: 153 CSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELDY--FAV 201
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 504 GRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 391
G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 166 GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPEFSEE 174
C +L+ L+ A C +PA + AG+ RR ++ V ++H EFS
Sbjct: 111 CGASLLSPGWALTAAHCVQRSS-NPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMG 169
Query: 175 NYDKDVSIVRVTHAIHFGPNI 237
+ DV+++R++ + I
Sbjct: 170 HLRNDVTLLRLSAPVQLSDKI 190
>SB_41410| Best HMM Match : 7tm_1 (HMM E-Value=0.00049)
Length = 780
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 338 VRYTAALNGSSPSEQINKNTLGYYDTLLIIAPCWMF 231
V A + S P + N+NT+G +D L + W++
Sbjct: 311 VEGVAVITSSVPPRKGNQNTIGIHDNLCLPRKSWIY 346
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 17 SPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLMFTLLLTIPNSL 169
SP+T+ Q++P + + L T + S +LPV + FT IP +
Sbjct: 143 SPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQSFRMTFTPPSMIPKPI 193
>SB_47586| Best HMM Match : NAD_binding_3 (HMM E-Value=2)
Length = 295
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 288 QKYPGVLRHLVDNSTLLDVWAEVDGMCYSYDAHILVVILLREFGMVNSKVNIR 130
+K+ G +H++D L + Y Y + VV LLR+ G+ NS I+
Sbjct: 31 KKFAGWSKHILDQLDLAKRTFFPALLTYRYSCDMKVVRLLRQRGLGNSSTQIQ 83
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 466 SRPPARTKPAQNLLSVTTRS*P 401
+RPP KPA N LS T RS P
Sbjct: 594 ARPPPTAKPAVNRLSPTRRSLP 615
>SB_16741| Best HMM Match : FYVE (HMM E-Value=7.1)
Length = 556
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 288 QKYPGVLRHLVDNSTLLDVWAEVDGMCYSYDAHILVVILLREFGMVNSKVNIR 130
+K+ G +H++D L + Y Y + VV LLR+ G+ NS I+
Sbjct: 132 KKFAGWSKHILDQLDLAKRTFFPALLTYRYSCDMKVVRLLRQRGLGNSSTQIQ 184
>SB_4715| Best HMM Match : FlpD (HMM E-Value=1.1)
Length = 705
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 288 QKYPGVLRHLVDNSTLLDVWAEVDGMCYSYDAHILVVILLREFGMVNSKVNIR 130
+K+ G +H++D L + Y Y + VV LLR+ G+ NS I+
Sbjct: 242 KKFAGWSKHILDQLDLAKRTFFPALLTYRYSCDMKVVRLLRQRGLGNSSTQIQ 294
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,563,225
Number of Sequences: 59808
Number of extensions: 534519
Number of successful extensions: 1317
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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