BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0967
(649 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 46 8e-07
Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related prot... 44 4e-06
Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-lik... 42 2e-05
Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein. 42 2e-05
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 40 5e-05
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 40 5e-05
AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease pr... 39 1e-04
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 37 6e-04
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 36 8e-04
Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precurso... 36 8e-04
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 36 8e-04
AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14... 34 0.003
Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase pr... 33 0.006
AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease pr... 33 0.006
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 31 0.031
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 31 0.042
Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein. 31 0.042
AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase ... 27 0.39
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 1.6
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 1.6
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 4.8
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 6.3
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 23 8.3
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 23 8.3
AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450 CY... 23 8.3
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 46.4 bits (105), Expect = 8e-07
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G VL+ L+ A C G P + GSSR + G + +V V HP++ +E
Sbjct: 74 CGGSVLSGKWILTAAHCTDGS--QPESLTVRLGSSRHASGGSVIHVARIVQHPDYDQETI 131
Query: 181 DKDVSIVRVTHAIHFGPNIQ 240
D D S++ + + F +Q
Sbjct: 132 DYDYSLLELESVLTFSNKVQ 151
Score = 38.7 bits (86), Expect = 2e-04
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +3
Query: 255 QQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKF 434
+Q + GI + GWG+T + S+ L + N++ C + Y + +T+
Sbjct: 157 EQDEAVEDGIMTIVSGWGST-KSAIESNAILRAANVPTVNQDECNQAYHKSEG-ITERML 214
Query: 435 CAGLVRAGGRDYDNTDLGAP 494
CAG + GG+D D G P
Sbjct: 215 CAG-YQQGGKDACQGDSGGP 233
Score = 29.1 bits (62), Expect = 0.13
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
G P + L+G+VS+G A YP V ++ +WI
Sbjct: 231 GGPLVAEDKLIGVVSWGAGCAQPGYPGVYARVAVVRDWI 269
>Z22930-2|CAA80514.1| 274|Anopheles gambiae trypsin-related
protease protein.
Length = 274
Score = 44.0 bits (99), Expect = 4e-06
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +3
Query: 255 QQGVVIPQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKF 434
+Q I +G + GWG T+ +D L + N++ C + Y+ +TD F
Sbjct: 155 EQDEPIEEGTMGIVSGWGLTLSEADTNDV-LRATNVPTVNQQECNKAYQSRYGGITDEMF 213
Query: 435 CAGLVRAGGRDYDNTDLGAP 494
CAG + GG+D D G P
Sbjct: 214 CAG-YKQGGQDTCRQDSGGP 232
Score = 28.3 bits (60), Expect = 0.22
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
G P + L+G++S+G A YP V ++S +WI
Sbjct: 230 GGPFVAEGKLIGVISWGHECALAGYPGVYPRVASVRDWI 268
>Z32645-1|CAA83567.1| 258|Anopheles gambiae chymotrypsinogen-like
protease ANCHYM2 protein.
Length = 258
Score = 41.9 bits (94), Expect = 2e-05
Identities = 20/87 (22%), Positives = 41/87 (47%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G +L + L+ A C G Y+P+ ++ G++ E GE+ V + H ++ +
Sbjct: 59 CGGSLLNDRWVLTAAHCLVG--YEPSDLMVLVGTNSLKEGGELLKVDKLLYHSRYNRPQF 116
Query: 181 DKDVSIVRVTHAIHFGPNIQQGAIINK 261
D+ ++R+ + F +Q + K
Sbjct: 117 HNDIGLMRLEQPVQFSELVQSVEYLEK 143
>Z18888-1|CAA79326.1| 258|Anopheles gambiae chymotrypsin 2 protein.
Length = 258
Score = 41.9 bits (94), Expect = 2e-05
Identities = 20/87 (22%), Positives = 41/87 (47%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G +L + L+ A C G Y+P+ ++ G++ E GE+ V + H ++ +
Sbjct: 59 CGGSLLNDRWVLTAAHCLVG--YEPSDLMVLVGTNSLKEGGELLKVDKLLYHSRYNRPQF 116
Query: 181 DKDVSIVRVTHAIHFGPNIQQGAIINK 261
D+ ++R+ + F +Q + K
Sbjct: 117 HNDIGLMRLEQPVQFSELVQSVEYLEK 143
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 40.3 bits (90), Expect = 5e-05
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G VL N L+ A C G DP+ + GSS + G + V V HP++
Sbjct: 76 CGGSVLDNKWVLTAAHCTQG--LDPSSLAVRLGSSEHATGGTLVGVLRTVEHPQYDGNTI 133
Query: 181 DKDVSIVRVTHAIHFGPNIQ 240
D D S++ + + F +Q
Sbjct: 134 DFDFSLMELETELTFSDLVQ 153
Score = 32.3 bits (70), Expect = 0.014
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
G P + LVG+VS+G A YP V ++S +W+ +N
Sbjct: 233 GGPLVADGKLVGVVSWGYGCAQPGYPGVYGRVASVRDWVREN 274
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 40.3 bits (90), Expect = 5e-05
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G VL N L+ A C G DP+ + GSS + G + V V HP++
Sbjct: 76 CGGSVLDNKWVLTAAHCTQG--LDPSSLAVRLGSSEHATGGTLVGVLRTVEHPQYDGNTI 133
Query: 181 DKDVSIVRVTHAIHFGPNIQ 240
D D S++ + + F +Q
Sbjct: 134 DFDFSLMELETELTFSDLVQ 153
Score = 32.3 bits (70), Expect = 0.014
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
G P + LVG+VS+G A YP V ++S +W+ +N
Sbjct: 233 GGPLVADGKLVGVVSWGYGCAQPGYPGVYGRVASVRDWVREN 274
>AJ271117-1|CAB88872.1| 355|Anopheles gambiae serine protease
protein.
Length = 355
Score = 39.1 bits (87), Expect = 1e-04
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 300 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 479
GWG T + S S+ L K+EL V + CR+ Y+G + + ++ CAG ++ G+D
Sbjct: 249 GWGKT-ESASASERKL-KVELTVQDPSRCRQIYRGINIALKASQMCAGGLQ--GKDTCTG 304
Query: 480 DLGAP 494
D G P
Sbjct: 305 DSGGP 309
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 36.7 bits (81), Expect = 6e-04
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +3
Query: 294 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 473
++GWG + S+S G + I++N + CR+ R+ TDN CAG GGRD
Sbjct: 120 VIGWGKASEW-SLSQGLQKAIVPIISNMQ-CRKSSYRASRI-TDNMLCAGYTE-GGRDAC 175
Query: 474 NTDLGAP 494
D G P
Sbjct: 176 QGDSGGP 182
Score = 33.9 bits (74), Expect = 0.004
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 506 KALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
+ LVGIVS+G+ A YP V T ++ + WI N
Sbjct: 191 RELVGIVSWGEGCARPNYPGVYTRVTRYLNWIKSN 225
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 36.3 bits (80), Expect = 8e-04
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G VL + L+ A C P+ + GSSR + G + V + HP + +
Sbjct: 74 CGGSVLNSKWILTAAHCTVN--LQPSSLAVRLGSSRHASGGTVVRVARVLEHPNYDDSTI 131
Query: 181 DKDVSIVRVTHAIHFGPNIQ 240
D D S++ + + F +Q
Sbjct: 132 DYDFSLMELETELTFSDVVQ 151
Score = 29.5 bits (63), Expect = 0.096
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
G P ++ LVG+VS+G A YP V ++ W+ +N
Sbjct: 231 GGPLVVDGKLVGVVSWGFGCAMPGYPGVYARVAVVRNWVREN 272
>Z22930-4|CAA80516.1| 267|Anopheles gambiae Trypsinogen precursor
of ANTRYP7 protein.
Length = 267
Score = 36.3 bits (80), Expect = 8e-04
Identities = 22/84 (26%), Positives = 36/84 (42%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G VL + L+ A C G + GSSR + G + V V HP + +
Sbjct: 67 CGGSVLNSKWVLTAAHCTDG--LQAFTLTVRLGSSRHASSGTVVNVARIVEHPNYDDSTI 124
Query: 181 DKDVSIVRVTHAIHFGPNIQQGAI 252
D D +++ + + F +Q A+
Sbjct: 125 DYDYALLELESELTFSDVVQPVAL 148
Score = 27.5 bits (58), Expect = 0.39
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
G P + L+G+VS+G A YP V ++ W+
Sbjct: 223 GGPLVADGKLIGVVSWGAGCAQPGYPGVYARVAIVRNWV 261
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 36.3 bits (80), Expect = 8e-04
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = +1
Query: 1 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENY 180
C G +L + L+ A C + Y + GSS + G + ++ V HP S
Sbjct: 72 CGGSILNSKWILTAAHCI--DLYSQVKPTVRVGSSEHAAGGTVLHLVRIVPHPGHSSSAN 129
Query: 181 DKDVSIVRVTHAIHFGPNIQ 240
+ D++++ + I F N+Q
Sbjct: 130 NYDIALLELESEITFNDNLQ 149
Score = 25.8 bits (54), Expect = 1.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
G P + L+G+VS+ YP V ++S EWI
Sbjct: 229 GGPFVAEGKLIGVVSWSHECELAGYPGVYARVASVREWI 267
>AF117748-1|AAD38334.1| 365|Anopheles gambiae serine protease 14A
protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.003
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 518 GIVSFGKSNANDIYPVVLTSISSFTEWILQNV 613
G++SFG A + +P V T +SS+ WI QN+
Sbjct: 332 GVISFGNQCALEGWPGVYTRVSSYLGWIRQNI 363
>Z49813-1|CAA89967.1| 247|Anopheles gambiae serine proteinase
protein.
Length = 247
Score = 33.5 bits (73), Expect = 0.006
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 273 PQGIFVDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 452
P G ++GWG T +GG++ + +++ + + CR R +T N CAG
Sbjct: 127 PAGQLGTVVGWGRTSEGGTL-PALVQHVDVPILTLDQCRSMKYRASR-ITSNMLCAG--- 181
Query: 453 AGGRDYDNTDLGAP 494
G +D D G P
Sbjct: 182 KGKQDSCQGDSGGP 195
Score = 27.9 bits (59), Expect = 0.29
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNV 613
+VGIVS+G YP V T ++ + W+ N+
Sbjct: 206 IVGIVSWGVGCGRAGYPGVYTRVARYLPWLRANL 239
>AJ250916-1|CAB91840.1| 435|Anopheles gambiae serine protease
protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.006
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 509 ALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
A+VGIVS+G +P + T +SS+ WI++N
Sbjct: 399 AVVGIVSWGIRCGEANHPGIYTRVSSYVRWIIEN 432
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 31.1 bits (67), Expect = 0.031
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +3
Query: 300 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 479
GWG G L ++ + + + E C Q + + D CAG + GG+D
Sbjct: 136 GWGKL--GDGTFPMKLQEVHVPILSNEQCHNQTQYFRFQINDRMMCAG-IPEGGKDSCQG 192
Query: 480 DLGAP 494
D G P
Sbjct: 193 DSGGP 197
Score = 24.6 bits (51), Expect = 2.7
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWI 601
+ G+VS+G A +P + ++ F WI
Sbjct: 210 IAGVVSWGFGCAQPRFPGIYARVNRFISWI 239
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 30.7 bits (66), Expect = 0.042
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
G P + LVG+VS+G A YP V + ++ +W+ +N
Sbjct: 230 GGPLVADGKLVGVVSWGYGCAQAGYPGVYSRVAVVRDWVREN 271
>Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 30.7 bits (66), Expect = 0.042
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 485 GCPCLLPKALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 610
G P + LVG+VS+G A YP V + ++ +W+ +N
Sbjct: 230 GGPLVADGKLVGVVSWGYGCAQAGYPGVYSRVAVVRDWVREN 271
>AF045250-1|AAC02700.1| 259|Anopheles gambiae serine proteinase
protein.
Length = 259
Score = 27.5 bits (58), Expect = 0.39
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 515 VGIVSFGKSNANDIYPVVLTSISSFTEWI 601
+G++S+G+ P+V +S+ F +WI
Sbjct: 224 IGVLSYGEKPCQARLPIVYSSVMYFHDWI 252
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVH 616
L GIVS+GK P V ++ + +WI Q ++
Sbjct: 1280 LTGIVSWGKHCGYANKPGVYLKVAHYRDWIEQKLN 1314
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 25.4 bits (53), Expect = 1.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 512 LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVH 616
L GIVS+GK P V ++ + +WI Q ++
Sbjct: 1280 LTGIVSWGKHCGYANKPGVYLKVAHYRDWIEQKLN 1314
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 23.8 bits (49), Expect = 4.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 373 LVTMSSSLWRLPSDTLPP*TVVPHPSRSTKIP 278
LVT S S LPS LP ++P P+ P
Sbjct: 91 LVTRSLSNLELPSCRLPCPNLIPRPAEVPTTP 122
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 35 FQLLPVSMENSTILHTVALSLDLPVAVSPVKY 130
F+ PV++ S++L +SLD P S +K+
Sbjct: 171 FEGYPVNISLSSVLLPAGVSLDDPETQSAIKW 202
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 14 FSPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSPVKYLM 136
+SP TTT P++ NS +H AL+L + + V + L+
Sbjct: 163 YSPRTTTTPEPPLADPNS--MHLFALTLSVCLCVGGLVVLL 201
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 23.0 bits (47), Expect = 8.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 351 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAP 494
KL L +E C + ++ + + CAG RA +D D G+P
Sbjct: 311 KLSLPYVEREKCSKTFRPWSFALGPGQMCAGGERA--KDTCAGDSGSP 356
>AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450
CYP6Z1 protein.
Length = 494
Score = 23.0 bits (47), Expect = 8.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 136 HKIFHRAHCDGKIQR*CDGMQDRRILHG 53
H++ H A K+QR D M +R HG
Sbjct: 313 HELTHNAEAMAKLQREVDEMMERH--HG 338
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,210
Number of Sequences: 2352
Number of extensions: 16948
Number of successful extensions: 66
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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