Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0965
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 5e-43
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 5e-43
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 1e-42
SB_56| Best HMM Match : Actin (HMM E-Value=0) 169 1e-42
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 169 1e-42
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 167 4e-42
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 150 1e-36
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 1e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 56 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 51 6e-07
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.005
SB_55379| Best HMM Match : SAM_2 (HMM E-Value=3e-05) 30 1.2
SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 171 bits (415), Expect = 5e-43
Identities = 79/84 (94%), Positives = 82/84 (97%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+
Sbjct: 222 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIS 281
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 282 ALAPPTMKIKIIAPPERKYSVWIG 305
Score = 70.5 bits (165), Expect = 9e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 307 SILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 171 bits (415), Expect = 5e-43
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EAL QPSFLGME++GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+
Sbjct: 233 EALLQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEIS 292
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPSTMKIKIIAPPERKYSVWIG
Sbjct: 293 ALAPSTMKIKIIAPPERKYSVWIG 316
Score = 70.5 bits (165), Expect = 9e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 318 SILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT
Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT 319
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 320 SLAPPTMKIKIIAPPERKYSVWIG 343
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 169 bits (412), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT
Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT 318
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
+LAP TMKIKIIAPPERKYSVWIG
Sbjct: 319 SLAPPTMKIKIIAPPERKYSVWIG 342
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 169 bits (411), Expect = 1e-42
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+
Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIS 319
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 320 ALAPPTMKIKIIAPPERKYSVWIG 343
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 345 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 167 bits (407), Expect = 4e-42
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+
Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEIS 318
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAP TMKIKIIAPPERKYSVWIG
Sbjct: 319 ALAPPTMKIKIIAPPERKYSVWIG 342
Score = 71.7 bits (168), Expect = 4e-13
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 344 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 150 bits (363), Expect = 1e-36
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EA+FQP+FLGMEA GIHE YN IMKCDVDIRKDLY+N VLSGG+TM+PGIADRMQKEI
Sbjct: 33 EAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIA 92
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
LA ++MK+K+IAPPERKYSVWIG
Sbjct: 93 MLANASMKVKVIAPPERKYSVWIG 116
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K+EY E GP IVHRKCF
Sbjct: 118 SILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EALFQP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI
Sbjct: 263 EALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIK 322
Query: 183 AL 188
L
Sbjct: 323 QL 324
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSG 131
E LFQPS LG + +GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2304 EPLFQPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Frame = +3
Query: 30 GMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 209
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 210 KII---APPERKYSVWIG 254
K+I + E++++ WIG
Sbjct: 206 KLISNNSSVEKRFNPWIG 223
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 EALFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 179
E F P F + + E N I C +D+R+ LY N VLSGG+TM+ R+Q++I
Sbjct: 207 EIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDI 266
Query: 180 TALAPSTMKI 209
+ +K+
Sbjct: 267 KRTVDARLKM 276
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
S+LAS F + +K +YDE GPSI F
Sbjct: 309 SMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 36 EANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 197
E + +S++ C +D RK L N VL GGT M PG R+ +EI L S
Sbjct: 54 EEKSLATALLDSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQS 107
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +3
Query: 69 SIMKCDVDIRKDLYANTVLSGGTTMYPG 152
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_55379| Best HMM Match : SAM_2 (HMM E-Value=3e-05)
Length = 1088
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 207 IKIIAPPERKYSVWIGDRSSPPSLPSNRCGSRNRSTTSLVPPLYTGSASK 356
+ +++ RK + G ++ PP P S+ S T +PP++ G SK
Sbjct: 449 LAVLSEQSRKSEAYSGLKTPPPVPPRRDTESKLTSGTREIPPVFRGVCSK 498
>SB_53791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1186
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 274 LYLPTDVDLETGVRRVWSLHC-TQEVLLSVETLSYDALQQNLK 399
L PT D G+RR W C + +VL T S AL ++L+
Sbjct: 730 LSAPTRTDRRQGIRRTWKSDCNSPDVLCRFFTDSLSALDESLR 772
>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 ANTVLSGGTTMYPGIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGDRSS 266
AN V+ + + +R+ KE+ L +K KIIAPPE S+ I ++S+
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPEWVNSLVIVEKSN 96
>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 ANTVLSGGTTMYPGIADRMQKEITALAP-STMKIKIIAPPERKYSVWIGDRSS 266
AN V+ + + +R+ KE+ L +K KIIAPPE S+ I ++S+
Sbjct: 44 ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPEWVNSLVIVEKSN 96
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 114 NTVLSGGTTMYPGIADRMQKEITALAP 194
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHET 59
E +FQPS LG+E GI ET
Sbjct: 4 EIIFQPSMLGLEQAGITET 22
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,341,410
Number of Sequences: 59808
Number of extensions: 409905
Number of successful extensions: 1048
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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