Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0965
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             175   4e-46
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.56 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   3.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.1  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  175 bits (425), Expect = 4e-46
 Identities = 82/84 (97%), Positives = 83/84 (98%)
 Frame = +3

Query: 3   EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
           EALFQPSFLGMEA GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT
Sbjct: 34  EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 93

Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
           ALAPSTMKIKIIAPPE+KYSVWIG
Sbjct: 94  ALAPSTMKIKIIAPPEKKYSVWIG 117



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 257 SILASLSTFQQMWIS 301
           SILASLSTFQQMWIS
Sbjct: 119 SILASLSTFQQMWIS 133


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +3

Query: 66  NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 245
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 246 WI 251
           WI
Sbjct: 397 WI 398


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 228 ERKYSVWIGDRSSPPSLPSNRCGSRNRSTTSLVPPLY 338
           E+  S+W  D +  P + + + GS++    + + P Y
Sbjct: 313 EKGQSIWDYDSTYIPKVKNKKAGSKHLLQNTWLDPEY 349


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 119 RIVRWYHHVPWNRRPYAK 172
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 119 RIVRWYHHVPWNRRPYAK 172
           RI+ +YH    +++PY K
Sbjct: 424 RIIDYYHSYKMHQKPYNK 441


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 281 FQQMWISKQEYDESGPSIVHRK 346
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,722
Number of Sequences: 438
Number of extensions: 3671
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)