Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0965
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 161 3e-40
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 160 6e-40
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 160 6e-40
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 160 6e-40
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 160 7e-40
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 158 3e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 158 3e-39
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 154 5e-38
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 154 5e-38
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 153 6e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 140 5e-34
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 118 2e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 68 4e-12
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 66 2e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 5e-10
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 50 1e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 4e-04
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 38 0.005
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 33 0.11
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.0
At5g43500.2 68418.m05318 expressed protein 29 2.3
At5g43500.1 68418.m05319 expressed protein 29 2.3
At1g62710.1 68414.m07078 vacuolar processing enzyme beta / beta-... 28 4.1
At1g53510.1 68414.m06068 mitogen-activated protein kinase, putat... 28 4.1
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 28 5.4
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 27 7.1
At3g61410.1 68416.m06877 hypothetical protein 27 7.1
At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative (CH... 27 7.1
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 27 9.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 161 bits (391), Expect = 3e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 160 bits (389), Expect = 6e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEIT
Sbjct: 261 EVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 346 SILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 160 bits (389), Expect = 6e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEIT
Sbjct: 261 EVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 160 bits (389), Expect = 6e-40
Identities = 73/84 (86%), Positives = 78/84 (92%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GIADRM KEIT
Sbjct: 261 EVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct: 346 SILASLSTFQQMWISKAEYDEAGPGIVHRKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 160 bits (388), Expect = 7e-40
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEIT
Sbjct: 261 EVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWISKSEYDESGPSIVHRKCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 158 bits (383), Expect = 3e-39
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E L+QPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEIT
Sbjct: 261 EVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 154 bits (373), Expect = 5e-38
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM KEIT
Sbjct: 261 EVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 154 bits (373), Expect = 5e-38
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +GME GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+ GI DRM KEIT
Sbjct: 261 EVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDRMSKEIT 320
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAPS+MKIK++APPERKYSVWIG
Sbjct: 321 ALAPSSMKIKVVAPPERKYSVWIG 344
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 346 SILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 153 bits (372), Expect = 6e-38
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQ S +GME +GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 262 EVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMNKEIN 321
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALAP +MKIK++APPERKYSVW+G
Sbjct: 322 ALAPPSMKIKVVAPPERKYSVWVG 345
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLS+F MWI+K EYDE G +IVHRKCF
Sbjct: 347 SILASLSSFAPMWITKAEYDEQGGAIVHRKCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 140 bits (340), Expect = 5e-34
Identities = 64/84 (76%), Positives = 71/84 (84%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +GME +GIHE TYNSIMKCD DIRKDLY N VLSGGTTM+ GI +RM KEI
Sbjct: 213 EVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEERMTKEIN 272
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
ALA + M+IKI+APPERKYSVWIG
Sbjct: 273 ALAAANMRIKIVAPPERKYSVWIG 296
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
SILASLST++QMWI+K EY+E+GP+IVH KCF
Sbjct: 298 SILASLSTYEQMWITKAEYEENGPAIVHTKCF 329
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 118 bits (285), Expect = 2e-27
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQPS +G E++GIHE T NSI+KC VD R+D+Y N +++GGTTM GI +RM KE+
Sbjct: 250 EVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKERMTKELN 309
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
AL PS+MK+K++ PPE + SVWIG
Sbjct: 310 ALVPSSMKVKVVVPPESECSVWIG 333
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKC 349
SILASLSTF QMWI+K EY+E G +IVHRKC
Sbjct: 335 SILASLSTFHQMWITKDEYEEHGAAIVHRKC 365
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 68.1 bits (159), Expect = 4e-12
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 11/95 (11%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI- 179
EALF P + +E +G+ + + I + D+D R LY + VLSGG+TMYPG+ R++KEI
Sbjct: 260 EALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQ 319
Query: 180 -----TALAPS-----TMKIKIIAPPERKYSVWIG 254
T L + ++++I PP RK+ V++G
Sbjct: 320 DRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLG 354
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/73 (38%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = +3
Query: 45 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA- 221
G+ SI KCDVDIR++LY++ +L+GGT+ + +R++K++ +P + ++K++A
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLAS 395
Query: 222 --PPERKYSVWIG 254
ER++SVWIG
Sbjct: 396 GNTTERRFSVWIG 408
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKC 349
SILASL +FQQMW SK EY+E G S + RKC
Sbjct: 410 SILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
EALFQPS LG+E +GI E I + + L NTVL GGTT G R QKE
Sbjct: 242 EALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN 301
Query: 183 ALAPSTMKIKIIAPPE------RKYSVWIG 254
L S ++ ++ PPE YS W+G
Sbjct: 302 -LCSSAIRPTLVKPPEYMPENLGMYSAWVG 330
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
+ILA + Q ++K +YDE+GPS+VHRKCF
Sbjct: 332 AILAKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 182
E LFQP+ LGM G+ E +I C ++ LY + +L+GG+T++P + +R++ E+
Sbjct: 304 ETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELR 363
Query: 183 ALAPSTMKIKIIAPPERKYSVWIG 254
L P +KI + VW G
Sbjct: 364 PLVPDHFDVKITTQEDPILGVWRG 387
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 257 SILASLSTFQQMWISKQEYDESGPSIVHRKCF 352
S+LAS F+ M ++K EY+E G + R+ F
Sbjct: 389 SLLASSPDFESMCVTKAEYEELGSARCRRRFF 420
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDV-DIRKD--LYANTVLSGGTTMYPGIADRMQK 173
E LFQP GM A +H+ + CD + D + VL+GG+ PG+++R+++
Sbjct: 354 EILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLER 413
Query: 174 EITALAPSTMK--IKIIAPPERKYSVWIG 254
E+ PS++ I++I PP + W G
Sbjct: 414 ELQDHLPSSISNGIRVIPPPYGVDTSWHG 442
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 EALFQPSFLGMEANGIHETTYNSIMKCDVD---IRKDLYANTVLSGGTTMYPGIADRMQK 173
E LF P+ +G++ G+ E SI + D + + L ++ +++GG ++ PG+ +R++
Sbjct: 600 EILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGMNERLEC 659
Query: 174 EITALAPSTMKIKIIAPPERKYSVWIG 254
I + P I ++ + W G
Sbjct: 660 GIRMIRPCGSPINVVRAMDPVLDAWRG 686
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 16/77 (20%)
Frame = +3
Query: 72 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS----------------TM 203
I +D R+ LY N VLSGG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 204 KIKIIAPPERKYSVWIG 254
++ +++ P ++++VW G
Sbjct: 373 EVNVVSHPVQRFAVWFG 389
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +3
Query: 48 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 227
I E Y I++ + KD Y N+ G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKD-YMNS--EGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 228 ERKYSVWIGDRSSPPSLPSNRCGSRNRSTTSLV 326
+RK++ ++ SN S N S + V
Sbjct: 393 DRKHASLPRSAVHSSAVNSNAQPSLNASDSRRV 425
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 251 DPYGVLPLWGSNDLNLHCRW-GESCD 177
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 36 EANGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 212
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 458 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 517
Query: 213 II 218
+
Sbjct: 518 TV 519
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 36 EANGIHETTYNSIMKCD-VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 212
E G+ E +SI+ +D+R+ L+++ L GG + G+ +++ + P T I
Sbjct: 470 EKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAID 529
Query: 213 II 218
+
Sbjct: 530 TV 531
>At1g62710.1 68414.m07078 vacuolar processing enzyme beta / beta-VPE
identical to SP|Q39044 Vacuolar processing enzyme,
beta-isozyme precursor (EC 3.4.22.-) (Beta-VPE)
{Arabidopsis thaliana}
Length = 486
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 29 GYGSQRHPRDHIQLHHEVRRGHP*GLVRQHRIVRWYHHV---PWNRRPYAKGNH 181
GYG+ RH D + +R+G GL ++ +V Y + P N RP NH
Sbjct: 61 GYGNYRHQADVCHAYQILRKG---GLKEENIVVLMYDDIANHPLNPRPGTLINH 111
>At1g53510.1 68414.m06068 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK18) mitogen-activated protein
kinase (MAPK)(AtMPK18), PMID:12119167
Length = 603
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +3
Query: 48 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 227
I E Y I++ + KD + + G +YP ++++ T L ++ + + P
Sbjct: 336 IRELIYREILEYHPQLLKDYMSGS--EGSNFVYPSAIGHLRQQFTYLEENSSRNGPVIPL 393
Query: 228 ERKYS 242
ERK++
Sbjct: 394 ERKHA 398
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 251 DPYGVLPLWGSNDLNLHCRW-GESCDFLLHTVGDS 150
DP GVL W HC W G +CD H V S
Sbjct: 44 DPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 248 PYGVLPLWGSNDLNLHCRWGESCDF 174
P GV+PL NDL+ WG S F
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPF 216
>At3g61410.1 68416.m06877 hypothetical protein
Length = 274
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 249 IGDRSSPPSLPSNRCGSRN 305
I +RSSPPSLP N G N
Sbjct: 253 ISNRSSPPSLPRNGTGHDN 271
>At1g05580.1 68414.m00578 cation/hydrogen exchanger, putative
(CHX23) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 867
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 235 FLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSLRMSTSHFM 74
FLSG M L +I+ G RA I F ++ MVV ++ L + TS FM
Sbjct: 333 FLSGILMPLFYIICGLRADIGFMLQFTDKFMMVVVICSSFLVKIVTTVITSLFM 386
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 248 PYGVLPLWGSNDLNLHCRWGESCDF 174
P GV+PL NDL+ WG S F
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPF 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,501,009
Number of Sequences: 28952
Number of extensions: 278572
Number of successful extensions: 817
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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