Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0964
         (681 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    26   0.96 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   1.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   8.9  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    23   8.9  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 26.2 bits (55), Expect = 0.96
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
 Frame = -1

Query: 378 LRDNGIDTGSGDNRGRASLVDVQNDLHERS--AVSNGGKRRVVSIAGPTEIGTLSSTMAG 205
           L +NG +  S   + + +     N L   S  + S+G      +++ P+     +++   
Sbjct: 167 LDENGGELPSNKQQQQLTSASSSNQLSNSSLCSASSGSSTYYGTMSEPS-----NASSPA 221

Query: 204 PTEIGSNSCDNGRSDGSGLELIYDGRSDSDRYKVVDDGSRSATP 73
           P+ +  +S   G S G G      G    + Y +  D S S TP
Sbjct: 222 PSHLSDHSSHGGTSGGGGCYAPIAGGFKHEPYDIYVDPSSSPTP 265


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = -1

Query: 393 NDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVSIAGPTEIGTLSST 214
           N+N+   +NG +TG+  N G +      N     S+V NG      S +G     T + T
Sbjct: 99  NNNNNNNNNGSNTGATVNSGSS------NAALSNSSVLNG------SNSGSATTTTTTPT 146

Query: 213 MAGPTEIGSNSCDNGRSDGS 154
             G    GSN+ +N  S  S
Sbjct: 147 NPGNGNGGSNNNNNSNSSSS 166


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +3

Query: 255 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 362
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 521 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 562


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +3

Query: 255 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 362
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 497 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 538


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -1

Query: 264 RVVSIAGPTEIGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSD 121
           R +S+ GPTE+G L   M  P    + + D+     S L  +YD + D
Sbjct: 199 RGLSVHGPTELGVLVRPMHPPNV--TCAWDHAGELASDLYALYDEQLD 244


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -1

Query: 264 RVVSIAGPTEIGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSD 121
           R +S+ GPTE+G L   M  P    + + D+     S L  +YD + D
Sbjct: 199 RGLSVHGPTELGVLVRPMHPPNV--TCAWDHAGELASDLYALYDEQLD 244


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 166 PAIVTRIRTYLRW 204
           P I TR+ +Y+RW
Sbjct: 416 PGIYTRVSSYVRW 428


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -2

Query: 614 KFRLRAPESGHGGHVDIDRYSV-KGLRKSD--SGCGNDGVATITC 489
           K   +  + G+     + RY + KG  ++D  S   +DG+ TITC
Sbjct: 43  KHEEKQDDHGYVSRHFVRRYMLPKGHNEADIVSSLSSDGILTITC 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,681
Number of Sequences: 2352
Number of extensions: 11644
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)