Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0964
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029112-1|AAH29112.1|  373|Homo sapiens SAM domain, SH3 domain ...    31   5.0  
AL163206-2|CAB90391.1|  373|Homo sapiens protein with homology t...    31   5.0  
AF222927-1|AAG23355.1|  373|Homo sapiens SAMSN1 protein.               31   5.0  
AF218085-1|AAK07746.1|  441|Homo sapiens SH3-SAM adaptor protein...    31   5.0  

>BC029112-1|AAH29112.1|  373|Homo sapiens SAM domain, SH3 domain and
           nuclear localization signals 1 protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 234 IGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSDSDRYKVVDDGSRS 82
           IGT +  ++       +S  +G+S  SG+    DG S+ D +++ DDG  S
Sbjct: 111 IGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYS 161


>AL163206-2|CAB90391.1|  373|Homo sapiens protein with homology to
           KIAA0790 protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 234 IGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSDSDRYKVVDDGSRS 82
           IGT +  ++       +S  +G+S  SG+    DG S+ D +++ DDG  S
Sbjct: 111 IGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYS 161


>AF222927-1|AAG23355.1|  373|Homo sapiens SAMSN1 protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 234 IGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSDSDRYKVVDDGSRS 82
           IGT +  ++       +S  +G+S  SG+    DG S+ D +++ DDG  S
Sbjct: 111 IGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYS 161


>AF218085-1|AAK07746.1|  441|Homo sapiens SH3-SAM adaptor protein
           protein.
          Length = 441

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 234 IGTLSSTMAGPTEIGSNSCDNGRSDGSGLELIYDGRSDSDRYKVVDDGSRS 82
           IGT +  ++       +S  +G+S  SG+    DG S+ D +++ DDG  S
Sbjct: 179 IGTHTEKVSLKASDSMDSLYSGQSSSSGITSCSDGTSNRDSFRLDDDGPYS 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,054,006
Number of Sequences: 237096
Number of extensions: 1641417
Number of successful extensions: 4361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4356
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)