Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0963
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.4  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   7.4  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 308 PVNKL*EMLSNSKVLKPAR*HLLR 237
           P+N   EML  +K+LK  R +L++
Sbjct: 384 PLNISREMLQQNKILKVIRKNLVK 407


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 341 LRPQ*TLLKEKSKFSTVN*PQTLLEESPCPT 433
           ++PQ T + +++  ST+N  + LL +  C T
Sbjct: 23  VKPQLTRISDEAIESTLNDRRYLLRQLKCAT 53


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 563 SDLTPEQVQLDFRVDF 516
           +DLTPEQ+Q     DF
Sbjct: 222 TDLTPEQIQAAEVKDF 237


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 419 IPPEASAVSLRSKIWTSPSAASI 351
           IPPE  + SL +    SPS+ ++
Sbjct: 317 IPPEPISASLSTSNSNSPSSTNL 339


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 419 IPPEASAVSLRSKIWTSPSAASI 351
           IPPE  + SL +    SPS+ ++
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNL 128


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 419 IPPEASAVSLRSKIWTSPSAASI 351
           IPPE  + SL +    SPS+ ++
Sbjct: 106 IPPEPISASLSTSNSNSPSSTNL 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,738
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)