SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0963
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131457-1|BAD18602.1|  619|Homo sapiens protein ( Homo sapiens ...    31   4.0  
BC051733-1|AAH51733.1| 1026|Homo sapiens LUZP1 protein protein.        31   5.3  
AK074153-1|BAB84979.1| 1046|Homo sapiens FLJ00226 protein protein.     31   5.3  
BC132735-1|AAI32736.1| 1205|Homo sapiens ADAMTS3 protein protein.      30   7.0  
BC130287-1|AAI30288.1| 1205|Homo sapiens ADAM metallopeptidase w...    30   7.0  
BC016451-1|AAH16451.1|  364|Homo sapiens ADAMTS3 protein protein.      30   7.0  
AB002364-1|BAA20821.1| 1201|Homo sapiens KIAA0366 protein.             30   7.0  
AL031428-1|CAI19705.1| 1026|Homo sapiens leucine zipper protein ...    30   9.3  

>AK131457-1|BAD18602.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16614 fis, clone TESTI4013365. ).
          Length = 619

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 170 VNNEYAGGWHLPGGENILKVRGSVEGVNAPASAPSNW 280
           + NE++G  H+P G+N   +RG  +G +   S   NW
Sbjct: 404 LGNEFSGKIHIPKGKNQEHIRGE-DGAHTQISESGNW 439


>BC051733-1|AAH51733.1| 1026|Homo sapiens LUZP1 protein protein.
          Length = 1026

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 77  VDLAESQRIVDGIIENW----ISRAQLRLSPFDPIVNNEYA 187
           + LAE++R+ DG ++N     +SR+ + + P DP+  N +A
Sbjct: 853 LQLAEAERMADGPLKNRPETVVSRSSIIIKPSDPVERNSHA 893


>AK074153-1|BAB84979.1| 1046|Homo sapiens FLJ00226 protein protein.
          Length = 1046

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 77  VDLAESQRIVDGIIENW----ISRAQLRLSPFDPIVNNEYA 187
           + LAE++R+ DG ++N     +SR+ + + P DP+  N +A
Sbjct: 846 LQLAEAERMADGPLKNRPETVVSRSSIIIKPSDPVERNSHA 886


>BC132735-1|AAI32736.1| 1205|Homo sapiens ADAMTS3 protein protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 220  PESSWLRRR-CQRAGFSTFELDSISYNLFTGQLHLSLSLNSVAASIDAAEGEVQIFDRKL 396
            P+ + LR+R  Q+AG  T  L ++  +  T ++HLS +    AAS  AA   +    +  
Sbjct: 1124 PDGANLRQRSAQQAGSKTVRLVTVPSSPPTKRVHLSSASQMAAASFFAASDSIGASSQAR 1183

Query: 397  TADASGGI 420
            T+   G I
Sbjct: 1184 TSKKDGKI 1191


>BC130287-1|AAI30288.1| 1205|Homo sapiens ADAM metallopeptidase with
            thrombospondin type 1 motif, 3 protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 220  PESSWLRRR-CQRAGFSTFELDSISYNLFTGQLHLSLSLNSVAASIDAAEGEVQIFDRKL 396
            P+ + LR+R  Q+AG  T  L ++  +  T ++HLS +    AAS  AA   +    +  
Sbjct: 1124 PDGANLRQRSAQQAGSKTVRLVTVPSSPPTKRVHLSSASQMAAASFFAASDSIGASSQAR 1183

Query: 397  TADASGGI 420
            T+   G I
Sbjct: 1184 TSKKDGKI 1191


>BC016451-1|AAH16451.1|  364|Homo sapiens ADAMTS3 protein protein.
          Length = 364

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 220 PESSWLRRR-CQRAGFSTFELDSISYNLFTGQLHLSLSLNSVAASIDAAEGEVQIFDRKL 396
           P+ + LR+R  Q+AG  T  L ++  +  T ++HLS +    AAS  AA   +    +  
Sbjct: 283 PDGANLRQRSAQQAGSKTVRLVTVPSSPPTKRVHLSSASQMAAASFFAASDSIGASSQAR 342

Query: 397 TADASGGI 420
           T+   G I
Sbjct: 343 TSKKDGKI 350


>AB002364-1|BAA20821.1| 1201|Homo sapiens KIAA0366 protein.
          Length = 1201

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +1

Query: 220  PESSWLRRR-CQRAGFSTFELDSISYNLFTGQLHLSLSLNSVAASIDAAEGEVQIFDRKL 396
            P+ + LR+R  Q+AG  T  L ++  +  T ++HLS +    AAS  AA   +    +  
Sbjct: 1120 PDGANLRQRSAQQAGSKTVRLVTVPSSPPTKRVHLSSASQMAAASFFAASDSIGASSQAR 1179

Query: 397  TADASGGI 420
            T+   G I
Sbjct: 1180 TSKKDGKI 1187


>AL031428-1|CAI19705.1| 1026|Homo sapiens leucine zipper protein 1
           protein.
          Length = 1026

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +2

Query: 77  VDLAESQRIVDGII----ENWISRAQLRLSPFDPIVNNEYA 187
           + LAE++R+ DG +    E  +SR+ + + P DP+  N +A
Sbjct: 853 LQLAEAERMADGPLKDRPETVVSRSSIIIKPSDPVERNSHA 893


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,197,162
Number of Sequences: 237096
Number of extensions: 1787566
Number of successful extensions: 4278
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -