Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0963
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z47356-6|CAA87419.1|  554|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical pr...    29   4.3  
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    29   4.3  
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical...    29   4.3  
Z75954-3|CAB00108.1|  323|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical ...    28   7.5  
U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z81094-7|CAB03153.2|  960|Caenorhabditis elegans Hypothetical
           protein F58G11.2 protein.
          Length = 960

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 173 NNEYAGGWHLPGGENILKVRGSVEGVNAPASAPSNWI 283
           NN Y G  +  GG +      S EGVNAP  AP +W+
Sbjct: 306 NNSYRGNSNNIGGFHRSDGSNS-EGVNAPVRAPRDWV 341


>Z47356-6|CAA87419.1|  554|Caenorhabditis elegans Hypothetical
           protein T15H9.6 protein.
          Length = 554

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 104 VDGIIENWISRAQLRLSPFDPIVNNEYAGGWHLPGGENILKVRGSVEGVNAPASAP 271
           +DG++++W+ +  +   P D + N   AGG  +P G   L V  S   +++   AP
Sbjct: 62  LDGLVKDWVQKTTISRIPKDQMFN---AGGKLIPFGSYRLGVHSSGADIDSIVVAP 114


>Z50016-8|CAA90315.1|  393|Caenorhabditis elegans Hypothetical
           protein T21C12.2 protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 459 DNSTSANAHVGHGDSSRSVCGQFTVENLD 373
           DNS   N  V HGD  + VC  F VE+LD
Sbjct: 77  DNSELGNHLVQHGDGVKDVC--FEVEDLD 103


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 345 RNRIQAQGQVKLTSE*VVGDAIQFEGAEAGALTPSTEP 232
           R R++  GQ+ + +E    DA     AEA A TPST P
Sbjct: 339 RRRLEKLGQLPVAAE-ASADASASASAEASAETPSTTP 375


>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.2 protein.
          Length = 1173

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 345 RNRIQAQGQVKLTSE*VVGDAIQFEGAEAGALTPSTEP 232
           R R++  GQ+ + +E    DA     AEA A TPST P
Sbjct: 339 RRRLEKLGQLPVAAE-ASADASASASAEASAETPSTTP 375


>Z75954-3|CAB00108.1|  323|Caenorhabditis elegans Hypothetical
           protein F58H1.5 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
 Frame = -3

Query: 258 GALTPSTEPRT-FRMFSPPGRCQPPAYSLFTIGSNGDKRNWALEIQFSIMPSTMRWDSAR 82
           G +TP         +  PP  C+PP      + S+G      +    S  P   +W+   
Sbjct: 230 GNMTPMNNMNNRMSLRKPPPTCRPPQPPQSPVPSDGSYEITRITGTSSDSPRDRQWNEDG 289

Query: 81  STSPYGTA 58
             S YGTA
Sbjct: 290 RESGYGTA 297


>AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical
           protein B0524.1 protein.
          Length = 534

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 225 FRMFSPPGRCQPPAYSLFTI-GSNGDKRNW 139
           FR+F PP R  PP  + F +  +N + R+W
Sbjct: 53  FRIFFPPPRVNPPIKTPFRLHNTNCEHRDW 82


>U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical
           protein C02B8.5 protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 637 WSTSPNTSSTDFCPDLLMRN 696
           WST  NT+S D CP  L  N
Sbjct: 76  WSTMYNTASKDVCPTALRSN 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,112,252
Number of Sequences: 27780
Number of extensions: 268581
Number of successful extensions: 845
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)