Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0962
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.95 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   6.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.7  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   8.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   8.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 232  HSSVRSQFQQDGGEHQRWRQNHPQSWYRRSQR 137
            HSS ++Q QQ   + Q+ +Q  PQ   ++ Q+
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQ 1526



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 600  ASRSLPTPSAPARLETM*SLPPPS 671
            AS   P P  P R+ T+   P PS
Sbjct: 1359 ASGGRPVPERPERVPTVDLSPSPS 1382


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 204 CWNCDRTDEWQNFH 245
           CW CD+ +E++  H
Sbjct: 467 CWVCDQCEEYEYVH 480


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 153 TVEVSGFLGASKTLGPGDTDLDVVV 79
           T +V G +GA   +G  D D D ++
Sbjct: 108 TGDVHGVIGAGHWIGDHDVDKDELI 132


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 365 SGEDVSCAKSEGELTXLGMPG 303
           +G D+S   + GE   LG+PG
Sbjct: 184 AGGDISSFITNGEWDLLGVPG 204


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 570 EPTTNKNAK*ASRS 611
           EP TNKN K  SRS
Sbjct: 239 EPGTNKNGKFFSRS 252


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 405 SYNMDTLHNDVAIINHNHVGFTNN 476
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 405 SYNMDTLHNDVAIINHNHVGFTNN 476
           S + +T+HN+    N+N+  + NN
Sbjct: 83  SLSNNTIHNNNYKYNYNNNNYNNN 106


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 154 TRIVGGSAANAGAHPHLAGI 213
           +RIVGG+       P +AGI
Sbjct: 159 SRIVGGTNTGINEFPMMAGI 178


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 204 CWNCDRTDEWQ 236
           CW CD+ +E++
Sbjct: 557 CWVCDQCEEYE 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,351
Number of Sequences: 438
Number of extensions: 3687
Number of successful extensions: 30
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)