Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0958
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 321 VLYVAPRVFWLAVNQFETSFIC 256
           ++Y+   +FW  VN     F+C
Sbjct: 258 IVYIIVVIFWYTVNASTNIFLC 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 321 VLYVAPRVFWLAVNQFETSFIC 256
           ++Y+   +FW  VN     F+C
Sbjct: 258 IVYIIVVIFWYTVNASTNIFLC 279


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 230 CVQDRGNAA*GSGRLVNVVPEPLES 156
           C+ DRG     +  L  V+P+ L+S
Sbjct: 44  CIMDRGACTPDADELKRVLPDALKS 68


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 178 LFLSHWKALRVFISLDVIAEVR 113
           +F+S WK L  F+S+  I  V+
Sbjct: 300 MFVSVWKCLLFFVSVLFILLVK 321


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 178 LFLSHWKALRVFISLDVIAEVR 113
           +F+S WK L  F+S+  I  V+
Sbjct: 300 MFVSVWKCLLFFVSVLFILLVK 321


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 178 LFLSHWKALRVFISLDVIAEVR 113
           +F+S WK L  F+S+  I  V+
Sbjct: 300 MFVSVWKCLLFFVSVLFILLVK 321


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 178 LFLSHWKALRVFISLDVIAEVR 113
           +F+S WK L  F+S+  I  V+
Sbjct: 300 MFVSVWKCLLFFVSVLFILLVK 321


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 596 LLNIYTIFFNYYKS 637
           L+N+YTI +N+ +S
Sbjct: 119 LINLYTINYNFKES 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,031
Number of Sequences: 336
Number of extensions: 2861
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)