Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0958
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   0.99 
AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical prote...    23   7.0  
AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosens...    23   7.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +2

Query: 161 PMAQEQR*PGDQNPRQRFHDLEHNNWTSPQREQINEVSNWLTANQNTLGATYSTALRAIE 340
           P  Q+Q+ P  Q P+Q+    + +    P + ++ EVS     +  +L     TA+R  E
Sbjct: 465 PQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLLLLVQTAVRTDE 524


>AJ973474-1|CAJ01521.1|  191|Anopheles gambiae hypothetical protein
           protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +1

Query: 415 GGCH*GDHRGTAYCSP--DRPTNRSSSCHPCTRSANVAAL 528
           GG + G   G    S   DRP        P T+S+NV A+
Sbjct: 135 GGSNGGSGVGNTVVSGGNDRPVRNDLDRQPATQSSNVQAI 174


>AJ697734-1|CAG26927.1|  191|Anopheles gambiae putative chemosensory
           protein CSP5 protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +1

Query: 415 GGCH*GDHRGTAYCSP--DRPTNRSSSCHPCTRSANVAAL 528
           GG + G   G    S   DRP        P T+S+NV A+
Sbjct: 135 GGSNGGSGVGNTVVSGGNDRPVRNDLDRQPATQSSNVQAI 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,249
Number of Sequences: 2352
Number of extensions: 13298
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)