Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0958
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099913-3|AAC68750.1|  143|Caenorhabditis elegans Hypothetical ...    32   0.45 
AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical ...    32   0.45 
U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical p...    27   9.7  
AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF099913-3|AAC68750.1|  143|Caenorhabditis elegans Hypothetical
           protein C29F9.9 protein.
          Length = 143

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 380 KFSAVTRRGSTAWSR*LVAPCCMWLPGCFGWPSTSSKPHLSVLVEETSNY 231
           K  +  R    A  R  +A C  W   CFG+P+  S+P     +EE SN+
Sbjct: 29  KVGSALRSRRCAAPRDTIAVCGAWRE-CFGFPANYSQPQFYSTIEEYSNH 77


>AF099913-2|AAC68749.1|  254|Caenorhabditis elegans Hypothetical
           protein C29F9.8 protein.
          Length = 254

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 380 KFSAVTRRGSTAWSR*LVAPCCMWLPGCFGWPSTSSKPHLSVLVEETSNY 231
           K  +  R    A  R  +A C  W   CFG+P+  S+P     +EE SN+
Sbjct: 29  KVGSALRSRRCAAPRDTIAVCGAWRE-CFGFPANYSQPQFYSTIEEYSNH 77


>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 268 LIYLFSLRRRPIIVFKIVETLPRVLVAWSTLFLSHWKALRVFISLDVIAEV 116
           +I++  LRRR     + V TLP+  + WS L        R+ ++LD++  +
Sbjct: 256 IIWISELRRRNRSQSRNVVTLPKYTIEWSKLENKSSGKSRIDLALDLLQRI 306


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 268 LIYLFSLRRRPIIVFKIVETLPRVLVAWSTLFLSHWKALRVFISLDVIAEV 116
           +I++  LRRR     + V TLP+  + WS L        R+ ++LD++  +
Sbjct: 256 IIWISELRRRNRSQSRNVVTLPKYTIEWSKLENKSSGKSRIDLALDLLQRI 306


>Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical
           protein C34C6.2 protein.
          Length = 821

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 4/31 (12%)
 Frame = +2

Query: 224 EHNNW----TSPQREQINEVSNWLTANQNTL 304
           +HNN+    TSP R     V+N+LTANQ T+
Sbjct: 633 QHNNFYADTTSPYRSAQRFVTNFLTANQATM 663


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 218 DLEHNNWTSPQREQINEVSNWLTANQNTL 304
           D  H N    +REQ  E+  W++ANQ TL
Sbjct: 93  DFYHENAAVSRREQY-EIDQWVSANQVTL 120


>Z73972-10|CAA98263.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/63 (23%), Positives = 24/63 (38%)
 Frame = +2

Query: 224 EHNNWTSPQREQINEVSNWLTANQNTLGATYSTALRAIETTRSNLVWSQQRISEFTNYFE 403
           +  N  S  +  +   +   T    T+G + STA   +E T +    S  R     NY +
Sbjct: 296 DFKNALSTSKVLVGTTTTSSTTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLK 355

Query: 404 SGY 412
             Y
Sbjct: 356 KKY 358


>AL021474-8|CAA16310.2|  388|Caenorhabditis elegans Hypothetical
           protein F15H10.4 protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/63 (23%), Positives = 24/63 (38%)
 Frame = +2

Query: 224 EHNNWTSPQREQINEVSNWLTANQNTLGATYSTALRAIETTRSNLVWSQQRISEFTNYFE 403
           +  N  S  +  +   +   T    T+G + STA   +E T +    S  R     NY +
Sbjct: 296 DFKNALSTSKVLVGTTTTSSTTQATTIGGSTSTAGTTVEATTTTQATSCARFKNLQNYLK 355

Query: 404 SGY 412
             Y
Sbjct: 356 KKY 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,810,600
Number of Sequences: 27780
Number of extensions: 269093
Number of successful extensions: 840
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)