Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0955
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    26   0.33 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   1.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   2.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.4  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 140 PPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNSLVLGSDSG 268
           P + R  L  L S L  G   P   +    + PN+++LG+ +G
Sbjct: 129 PVVKRRLLQHLASCLNQGQKEPQVQVIVPEVAPNNIILGNGTG 171


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GEVSKHSIPWLSTPIVYTETSYV 482
           GE+ + +  W S P++Y    YV
Sbjct: 74  GEIGRITFGWTSIPMLYAYVFYV 96


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GEVSKHSIPWLSTPIVYTETSYV 482
           GE+ + +  W S P++Y    YV
Sbjct: 74  GEIGRITFGWTSIPMLYAYVFYV 96


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 550 GEVSKHSIPWLSTPIVYTETSYV 482
           GE+ + +  W S P++Y    YV
Sbjct: 74  GEIGRITFGWTSIPMLYAYVFYV 96


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 390 QTRRNPEWRMRTT 352
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 299 CSNTSSGTSYSHCRC 255
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 299 CSNTSSGTSYSHCRC 255
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 359 EQLLLEGGVPGIAD 318
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,690
Number of Sequences: 336
Number of extensions: 3970
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)