Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0955
         (684 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase su...    62   4e-10
D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase su...    62   4e-10
AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical...    62   4e-10
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U00065-2|AAL27237.1|  672|Caenorhabditis elegans Prion-like-(q/n...    29   4.1  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AC006632-1|AAK85466.1|  311|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z72502-3|CAA96593.2|  218|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    27   9.4  
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    27   9.4  

>D86741-2|BAA21841.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = +3

Query: 303 FGSLIIGYARNPSLKQQLFSYAILGFALSE 392
           FG+L+IGYARNPSLKQQLFSYAILGFALSE
Sbjct: 46  FGALVIGYARNPSLKQQLFSYAILGFALSE 75



 Score = 34.7 bits (76), Expect = 0.062
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 AVRSFQTTSVTKDIDSAAKFIGAG 255
           A R   TT   KDIDSAAK+IGAG
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAG 29


>D86740-2|BAA13165.1|   92|Caenorhabditis elegans ATP synthase
           subunit protein.
          Length = 92

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = +3

Query: 303 FGSLIIGYARNPSLKQQLFSYAILGFALSE 392
           FG+L+IGYARNPSLKQQLFSYAILGFALSE
Sbjct: 46  FGALVIGYARNPSLKQQLFSYAILGFALSE 75



 Score = 34.7 bits (76), Expect = 0.062
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 AVRSFQTTSVTKDIDSAAKFIGAG 255
           A R   TT   KDIDSAAK+IGAG
Sbjct: 6   AARMISTTVARKDIDSAAKYIGAG 29


>AC090999-18|AAK26152.1|  116|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.3 protein.
          Length = 116

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = +3

Query: 303 FGSLIIGYARNPSLKQQLFSYAILGFALSE 392
           FG+L+IGYARNPSLKQQLFSYAILGFALSE
Sbjct: 70  FGALVIGYARNPSLKQQLFSYAILGFALSE 99



 Score = 34.7 bits (76), Expect = 0.062
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 AVRSFQTTSVTKDIDSAAKFIGAG 255
           A R   TT   KDIDSAAK+IGAG
Sbjct: 30  AARMISTTVARKDIDSAAKYIGAG 53


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 111 CTGATTCSSTHPYTDGTCCPYTALCSAVLP 200
           C+    C +     D  CCPY + C A  P
Sbjct: 189 CSATKPCPNGFSCNDKKCCPYASACPAGAP 218


>U00065-2|AAL27237.1|  672|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 25
           protein.
          Length = 672

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 51  NAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 176
           N  C     P       +  C+  T C+S +   +G CCP T
Sbjct: 106 NTQCGSNSSPQVSASGQVVTCSTNTQCASGYTCNNGACCPNT 147


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 156 HLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQRT 13
           ++C  G CC  ++    +  G P   G  S G Q F  +  G R QR+
Sbjct: 103 YICSNGACCPNTNSNTCSTTGTPCFTGQISVGGQCFNSVNIGDRCQRS 150


>AC006632-1|AAK85466.1|  311|Caenorhabditis elegans Hypothetical
           protein F28A10.1 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 436 KSSRNAIIRQNRPIASDKAKPRMAYENNCCLREGFLA*PMMRE 308
           KSSR  I  ++  I     KP    E N C+ + FLA PM  E
Sbjct: 21  KSSRTLIQPKSSKIQLKSFKPTFFEEWNSCVAQKFLAIPMTAE 63


>Z72502-3|CAA96593.2|  218|Caenorhabditis elegans Hypothetical
           protein C08B6.6 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 604 PVDAHCRCNTHQSLHHYEGEV 542
           P+   CRCNT  +LH  EG V
Sbjct: 98  PIYVLCRCNTTNTLHRREGVV 118


>AL032621-5|CAA21492.2|  404|Caenorhabditis elegans Hypothetical
           protein Y45F3A.8 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -1

Query: 231 RVNVLSDRCGLEGPHCR---ELCRDSRYHLCMGGYCCKWSHQC 112
           RV   ++ C    P CR   +LC  SRY   M  YC K    C
Sbjct: 321 RVEEGTEDCEDMTPDCRNYRDLCEHSRYKTLMENYCPKACGHC 363


>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 102 LQLCTGATTCSSTHPYTDGTCCPYTA 179
           +Q C+G   C  TH   +  CCP  A
Sbjct: 373 VQRCSGKEHCPETHDCKNTVCCPKPA 398


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 255 PSTNEFGSRVNVLSDRCGLEGPH 187
           PS N +G+RV  LSD  G+   H
Sbjct: 127 PSENGYGARVETLSDNSGISFEH 149


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 255 PSTNEFGSRVNVLSDRCGLEGPH 187
           PS N +G+RV  LSD  G+   H
Sbjct: 163 PSENGYGARVETLSDNSGISFEH 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,670,466
Number of Sequences: 27780
Number of extensions: 373739
Number of successful extensions: 1326
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)