Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0954
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 39 0.005
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 38 0.006
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 38 0.006
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.011
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.019
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 36 0.025
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.025
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.034
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 35 0.059
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.059
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.078
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 35 0.078
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 33 0.31
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2) 31 0.96
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.3
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 31 1.3
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.7
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.2
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 30 2.2
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 2.9
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.1
SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6) 29 5.1
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_36834| Best HMM Match : Rap_GAP (HMM E-Value=0.00045) 28 6.7
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16) 28 6.7
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 28 6.7
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_53042| Best HMM Match : DUF630 (HMM E-Value=9.4) 28 8.9
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.9
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_10894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.9
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +2
Query: 479 PSQWKQQLCWTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS-T 655
PS + + G+GRT S A Q Q L V ++ C RT G V + S +
Sbjct: 143 PSSGSRAQAGARCYITGWGRTVGGGSAAGILQ--QAMLPVAGDSDCQRTNGRLVPVDSRS 200
Query: 656 LCVDGSNGRSTCSGDSGG 709
+ G G+ C GDSGG
Sbjct: 201 MICAGGQGKGGCQGDSGG 218
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 578 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGGLSHRQRR 730
R + ++ N VC R+ +N T C DG G TC GDSGG R+ R
Sbjct: 249 RHSAFEIQPNDVCDRSTRHNFNATVTFCAGDGKGGNDTCHGDSGGSFVREFR 300
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGS--NGRSTC 691
W G+GR D+ SG +Q + + ++ C R +G+ + + LC + N C
Sbjct: 69 WLTGWGRQVDS-SGPLPDILQQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGAC 127
Query: 692 SGDSGG 709
GDSGG
Sbjct: 128 QGDSGG 133
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 464 HPAHQPSQWKQQLCWTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVI 643
HP P + + W G+GR S + G+ +QVS+ + + A C ++ N I
Sbjct: 9 HPVCLPELDPEPVDGKHCWVTGWGRLS--SGGSTPDYLQQVSVPIRSRARCDSSYPNK-I 65
Query: 644 IASTLCVD-GSNGRSTCSGDSGG 709
S +C G C GDSGG
Sbjct: 66 HDSMICAGIDKGGIDACQGDSGG 88
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRS 685
T W G+GR A+ G +Q S+ V++ A C + + I S LC G
Sbjct: 823 TRCWITGWGRL--ASGGTAPDILQQASVPVVSRARCEKAYPGK-IHDSMLCAGLDQGGID 879
Query: 686 TCSGDSGG 709
TC GDSGG
Sbjct: 880 TCQGDSGG 887
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 527 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSG 706
G+GR S + + +Q + ++ C T G V S +C G+ G S C+GDSG
Sbjct: 416 GWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAGGA-GSSACNGDSG 474
Query: 707 G 709
G
Sbjct: 475 G 475
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +3
Query: 264 SVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLHNDVAIIN-H 440
++TAAHC T A +TL G + G S ++ H ++M + NDVA++
Sbjct: 276 ALTAAHCL-TLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLS 334
Query: 441 NHVGFTNNIQRINLAS 488
+V ++ + I L S
Sbjct: 335 TYVQLSDKVGTICLPS 350
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 36.7 bits (81), Expect = 0.019
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSG 697
+ G+GR S + + +Q V+ + CA +T+ G +G S CSG
Sbjct: 437 YTTGWGRVSGSMMFFMATKLQQARTPVVDHETCAIKLDKFAADKTTMICAGGSGSSACSG 496
Query: 698 DSGG 709
DSGG
Sbjct: 497 DSGG 500
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 524 AGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSG 697
AG+GR + + A Q+ + L V +NA C + G + + AS +C G GR C G
Sbjct: 532 AGWGRVFEGSDEAEFLQEAE--LVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQG 588
Query: 698 DSGG 709
DSGG
Sbjct: 589 DSGG 592
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 500 LCWTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNG 679
L T + +G+GR +++ G+N Q + S+ ++ C + N I + + G G
Sbjct: 1907 LAGTPCYVSGWGRIGESSPGSNVLQ--EASIPLVDQRACEEQYRNLKPITARMRCAGIYG 1964
Query: 680 --RSTCSGDSGG 709
+ TC GDSGG
Sbjct: 1965 TPKGTCKGDSGG 1976
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 35.9 bits (79), Expect = 0.034
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +2
Query: 455 HQQHPAHQPSQWKQQLCWTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGN 634
H PA P + Q T + G+G T +GA Q Q + V+++ C R
Sbjct: 392 HTISPACLPGLYDQVTSGTMCYVTGWGMTEYGNAGARLLQ--QARIPVVSSEECERVNNK 449
Query: 635 N--VIIASTLCVD--GSNGRSTCSGDSGG 709
+ V + LC G++ S C GDSGG
Sbjct: 450 HRKVDKVTMLCAGNGGNSSISGCHGDSGG 478
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.9 bits (79), Expect = 0.034
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCV--DGSNGRSTC 691
+ AG+GR A Q Q + +++ C R +G + S +CV + N S+C
Sbjct: 447 YIAGWGRLQSLGDVALTLQ--QAKVPIVSKEDCKRAYGAIIRPYSHICVGFNTENAASSC 504
Query: 692 SGDSGG 709
GDSGG
Sbjct: 505 QGDSGG 510
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.1 bits (77), Expect = 0.059
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 497 QLCWTWAWAAGFGRTSDAASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-G 670
Q CW W ASG N K Q S+ +++ + C + N I S LC
Sbjct: 74 QKCWITGWGT-------LASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLD 125
Query: 671 SNGRSTCSGDSGG 709
+ G C GDSGG
Sbjct: 126 AGGIDACQGDSGG 138
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.1 bits (77), Expect = 0.059
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 497 QLCWTWAWAAGFGRTSDAASGANNQQK-RQVSLQVITNAVCARTFGNNVIIASTLCVD-G 670
Q CW W ASG N K Q S+ +++ + C + N I S LC
Sbjct: 418 QKCWITGWGT-------LASGGNQPNKLMQASVPLVSQSKCNTAYPNK-IHDSMLCAGLD 469
Query: 671 SNGRSTCSGDSGG 709
+ G C GDSGG
Sbjct: 470 AGGIDACQGDSGG 482
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 34.7 bits (76), Expect = 0.078
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVI-IASTLCVDGSNGRS 685
T W G+GR + GA+ + +Q ++++ A C + ++ST+ G
Sbjct: 340 TECWITGWGRLH--SGGASPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCAQVPGID 397
Query: 686 TCSGDSGG 709
TC GDSGG
Sbjct: 398 TCQGDSGG 405
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVII--ASTLCVDGSNGRSTCSGD 700
G+GR + + A Q+ + L V +NA C + G + + AS +C G GR C GD
Sbjct: 73 GWGRVFEGSDEAEFLQEAE--LVVASNAKCDKKNGELLPVDDASMVCAGGP-GRGGCQGD 129
Query: 701 SGG 709
SGG
Sbjct: 130 SGG 132
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 246 LTDNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQM---HGSYNMDTLH 416
L +T VTAAHC R + Q+ + +G N T NV+ H YN L
Sbjct: 506 LVSSTWVVTAAHCV-ARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLS 564
Query: 417 NDVAII 434
ND+A+I
Sbjct: 565 NDIALI 570
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 33.1 bits (72), Expect = 0.24
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 9/157 (5%)
Frame = +3
Query: 45 WQKSPSNSTTTSRSVSPGPRVLDAPR-KPLTSTVP-----GLWVVLPQTLVLTPILLDL* 206
W + + SRS +P P +L + PLT+T P L ++ LT + +
Sbjct: 704 WGQEQTQEPLASRSATPSPVILQSMGVAPLTTTTPVSQGCESQSALTNSVTLTNLATNT- 762
Query: 207 SH*RMAELPSAEFLTDNTRSVTAAH--CWRTRRAQARQFTLALGTANIFSGGTRVTTSNV 380
H R + E T VT + + A Q L AN + VT +N
Sbjct: 763 CHVRPLNQVTQEICATPTSHVTDTNKVTHASHVTLASQVALPYQVANQVTHSNHVTLANQ 822
Query: 381 QMHGSYNMDTLHNDVAIINH-NHVGFTNNIQRINLAS 488
H N TL N V NH H G + + A+
Sbjct: 823 VTH--VNHVTLANQVTHANHVTHAGQVTHANHVTFAN 857
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 530 FGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCSGDSG 706
+GRT++ G++ QV + +++ + C+R + + S +C S G +C GDSG
Sbjct: 2 WGRTAEG--GSSPTVLMQVEVPIVSASTCSRAYSR--LHESMVCAGRASGGIDSCQGDSG 57
Query: 707 G 709
G
Sbjct: 58 G 58
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 32.3 bits (70), Expect = 0.41
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +2
Query: 479 PSQWKQQLCWTWAWAAGFGR--TSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIAS 652
PSQ + + +G+GR +SD AN Q+ +VS+ V+ S
Sbjct: 73 PSQGARASLGGNCFISGWGRINSSDMQLLANKLQQSRVSIIENNKCKVKNDCHYKVLDKS 132
Query: 653 TLCVDGSNGRSTCSGDSGG 709
+C G+ G S C GDSGG
Sbjct: 133 MVCAGGA-GSSICHGDSGG 150
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGR-S 685
T + G+G S + G+ + Q + + T + C R++ I A +C G
Sbjct: 754 TMCYITGWGTLS--SGGSQPEALNQAVVPLRTRSECERSYPGK-ISADMICAGNPEGGVD 810
Query: 686 TCSGDSGG 709
TC GDSGG
Sbjct: 811 TCQGDSGG 818
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNN--VIIASTLCV-DGSNGRST 688
W GR D + ++ + ++ + VC + F + + + C S G+
Sbjct: 244 WGKTVGRQGDVSVKNLADALKETCMPIVNSHVCNQAFQDEGYSVTPNMFCAGQASGGKDI 303
Query: 689 CSGDSGG 709
C GDSGG
Sbjct: 304 CQGDSGG 310
>SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2)
Length = 919
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 377 IGGGDPGASGEDVSCAKSEGELTSLGSPGPPAMSGGHGAG 258
+GG GA D +G+LT+ G GPP+ + G G+G
Sbjct: 129 LGGQGGGALKIDTRHFVLDGQLTADGEAGPPSSTAGGGSG 168
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSG 697
+ G+GR + + RQ + ++ + C R + T+ G G S C+G
Sbjct: 64 YITGWGRYHSTITNPA-KSLRQSLVPLVDHVTCKRGLKEFYLDEETMMCVGGAGSSACNG 122
Query: 698 DSGG 709
DSGG
Sbjct: 123 DSGG 126
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG- 679
T + G+G T+ S + N + +V L ++ ++ C T+ + I C G+ G
Sbjct: 418 TLCYVTGWGSTNYRGSPSPNYLQ-EVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGV 475
Query: 680 -RSTCSGDSGG 709
++ CSGDSGG
Sbjct: 476 AKAVCSGDSGG 486
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = -3
Query: 362 PGASGEDVSCAKSEGELTSLGSPGPPAMSGGHGAGVVSKELRRWK---FC-HSSVRSQVQ 195
P S ++ AKS SLG P PP ++G HGA E R+ FC H+ V
Sbjct: 1157 PVGSTAVLASAKSSSGTYSLGHPHPP-LAGLHGARTSRPEDHRFPTLGFCVHTDFTPVVV 1215
Query: 194 QDGGEHQRLRQNHPQSWYRRSQ-RLPRR 114
+ +++R++ Q+ Y R Q R+ R+
Sbjct: 1216 E--CSRKQVRRSRKQARYSRKQARISRK 1241
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTF--GNNVIIASTLCVDGSNG- 679
T + G+G T+ S + N + +V L ++ ++ C T+ + I C G+ G
Sbjct: 667 TLCYVTGWGSTNYRGSPSPNYLQ-EVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGV 724
Query: 680 -RSTCSGDSGG 709
++ CSGDSGG
Sbjct: 725 AKAVCSGDSGG 735
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +2
Query: 527 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTCSGDSG 706
G+GRT GA Q+ + + + + V S +C G C GDSG
Sbjct: 94 GWGRTVGGGQGAEILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAGGCQGDSG 153
Query: 707 G 709
G
Sbjct: 154 G 154
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 464 HPAHQPSQWKQQLCWTWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVC-ARTFGNNV 640
H PS T + G+G+T++ + + ++ + +++ VC A N
Sbjct: 101 HSVCLPSVTANLTTGTKCFVTGWGKTAEGSP--YSPVLNELEVDIVSKEVCNANDSYNGT 158
Query: 641 IIASTLCVD-GSNGRSTCSGDSGG 709
I C GR +C GDSGG
Sbjct: 159 INDRYFCAGFPQGGRDSCGGDSGG 182
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 578 RQVSLQVITNAVCARTFGNNVIIASTLCV-DGSNGRSTCSGDSGGLSHRQRR 730
R + V + +C + + T C +G G TC GDSGG R+ R
Sbjct: 191 RHTAFTVQPDRICRGSTSYHFNATITFCAGEGKGGNDTCRGDSGGSFVREVR 242
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Frame = +2
Query: 527 GFGRTSDAASGANNQQKRQVSLQVITNAVCA-RTFGN-NV--------IIASTLCVD--G 670
G+GR+ AN Q Q L+V++N C+ R G+ N+ + + LC G
Sbjct: 160 GWGRSYYPGPTANKLQ--QADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDAG 217
Query: 671 SNGRSTCSGDSGG 709
G++ C+GDSGG
Sbjct: 218 KTGKNGCNGDSGG 230
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 694
+ G+G+ S S + Q Q ++ V+ A C + + I S LC + G C
Sbjct: 451 YITGWGKLSSHGSAPDILQ--QATVPVVGRARCMKAYRGQ-IHESMLCAGLDAGGVDACQ 507
Query: 695 GDSGG 709
GDSGG
Sbjct: 508 GDSGG 512
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 267 VTAAHCWRTRRAQARQFTLALGTANIFSGGTR----VTTSNVQMHGSYNMDTLHNDVAII 434
+TAAHC ++R + + LG + T + S + H +YN T++ND+A++
Sbjct: 428 LTAAHCISSKRPA--EVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 75 TSRSVSPGPRVLDAPRKPL 131
TS P PRVLD+PRKPL
Sbjct: 379 TSLLAYPTPRVLDSPRKPL 397
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = -3
Query: 263 AGVVSKELRRWKFCHSSVRSQV---QQDGGEHQRLRQNHPQSWYRRSQRLPRRV*DSRPG 93
AGV + ++R W FC S+ D H R N+ +R S + +
Sbjct: 538 AGVTADDVRYWMFCQKKQTSECLPPTNDSLSHHIKRANYQAYIWRSSTTAMQNLPLPENN 597
Query: 92 GYRS*CGSRVRWALLPRPRPPTPSILL 12
G+R+ G + L PR P P LL
Sbjct: 598 GWRNNAG---QLEPLLMPRDPAPEGLL 621
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 381 QMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSNN 500
Q H N+ ++N+ IIN+N++ NNI N+ +NN
Sbjct: 384 QQHHHQNI-IINNNNIIINNNNIIINNNINNNNIIINNNN 422
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 57 PSNSTTTSRSVSPGPRVLDAPRKPLTSTVPGL 152
PS STT++ + P P P KP ST PG+
Sbjct: 1335 PSPSTTSTTPIKPSPST--TPIKPSPSTTPGV 1364
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Frame = -3
Query: 368 GDPGASGE--DVSCAKSE----GELTSLGSPGPPAMSGGHG 264
G+PG +GE +V K E G+ +G+PGPP + G G
Sbjct: 730 GEPGPTGEKGEVFRIKGEKGAKGQQGGIGNPGPPGLRGDVG 770
>SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 SWQKSPSNSTTTSRSVSPG-PRVLDAPRKPLTSTVP 146
S+ K SNS T S S SPG P VL+ P +S P
Sbjct: 14 SYPKRNSNSHTASNSCSPGDPLVLERPPPRWSSNSP 49
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 524 AGFGRTS--DAA--SGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVDGSNGRSTC 691
AG+G T DA+ SG +QV L +++ VC N + D R C
Sbjct: 854 AGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVNHTNAITKRMRCAGDVMGERDAC 913
Query: 692 SGDSG 706
GDSG
Sbjct: 914 KGDSG 918
>SB_8029| Best HMM Match : Mucin (HMM E-Value=8.6)
Length = 325
Score = 28.7 bits (61), Expect = 5.1
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 11/141 (7%)
Frame = +3
Query: 63 NSTTTSRSVSPGPRVLDAPRKPLTSTVPGLWVVLPQTLVLTPILLDL*SH*RMAELPSAE 242
+STT + + + P+ AP+ P+ T+P PQT +T + + A + E
Sbjct: 156 SSTTVASTTTETPKTTKAPKTPI--TIPKTTTNRPQTSTITAKITTESTTATQATTKTKE 213
Query: 243 FLTD--------NTRSVTAAHCWRTRRAQARQFTLALGT--ANIFSGGTRVTTSNVQMHG 392
+ T+ T + A T AQA T A T + G T S +
Sbjct: 214 YTTNKPSTTEESTTNEASTAEFESTTAAQATTKTEAYTTKKPSTTEGSTTTEASTAEFTF 273
Query: 393 SYNMDTLHNDVAI-INHNHVG 452
+ ++ + I N+NHVG
Sbjct: 274 TPTKSSVKSTHTIKNNNNHVG 294
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 58 GLFCHDHGRQRHQYCCEDL 2
G FCH H R CC+DL
Sbjct: 601 GSFCHIHPTDRFAVCCKDL 619
>SB_36834| Best HMM Match : Rap_GAP (HMM E-Value=0.00045)
Length = 545
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 45 WQKSPSN-STTTSRSVSPGPRVLDAPRKPLTSTVPGLWVVLPQTL 176
+ K PS SR SP P L P PL + + ++ QTL
Sbjct: 414 YHKQPSTFEEFASRVFSPAPNTLSRPSTPLGTAAEAMTIMRTQTL 458
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 368 GDPGASGEDVSCAKSEGELTSLGSPGPPAMSGGHG 264
G PG SG V T +G PGPP +G G
Sbjct: 483 GPPGPSGRYVPGPPGPPGRTVIGLPGPPGPAGPRG 517
>SB_24257| Best HMM Match : DUF583 (HMM E-Value=0.16)
Length = 3999
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 374 GGGDPGASGEDVSCAKSEGELTSLGSPGPPAMSGGHGAGVVS 249
GGG G+ + S + G L G G GG G G+VS
Sbjct: 1615 GGGSGGSLFINASIIQGTGTLDVQGGRGGAISGGGGGGGIVS 1656
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 368 GDPGASGEDVSCAKSEGELTSLGSPGPPAMSGGHG 264
G PGA G GE S GS GP +GG G
Sbjct: 114 GQPGAQGRP-GAPGDRGERGSAGSDGPKGEAGGPG 147
>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1060
Score = 27.9 bits (59), Expect = 8.9
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -2
Query: 696 PLQVLRPLEPSTQRVEAMITLFPNVRAQTALVMTWRLTWRFCWLLAPEAASEVL 535
P Q LEP VE ++T V A TA V L R L PE+A+E L
Sbjct: 118 PFQSAESLEPLLLMVEQLVTSPRAVDASTASVYLKILVDRCMVPLYPESATEYL 171
>SB_53042| Best HMM Match : DUF630 (HMM E-Value=9.4)
Length = 173
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 290 PPAMSGGHGAGVVSKELRRWKFCHSSVRSQVQQD 189
PP + G + SK+L R K CH + RS QQD
Sbjct: 81 PPVSARGLTEDLWSKDLLR-KVCHETTRSIYQQD 113
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 509 TWAWAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGN-NVIIASTL-CVD-GSNG 679
T + +G+G +A G Q ++ +++ C + + + + ++S + C G+ G
Sbjct: 232 TQCYISGWGHLQEAGHGP--WVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGG 289
Query: 680 RSTCSGDSGG 709
C GDSGG
Sbjct: 290 IDACQGDSGG 299
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 518 WAAGFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIASTLCVD-GSNGRSTCS 694
+ G+G S + GA + Q S+ +++ + C I S LC G +C
Sbjct: 157 YITGWGSLS--SGGAAPDRLMQASVPLVSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQ 214
Query: 695 GDSGG 709
GDSGG
Sbjct: 215 GDSGG 219
>SB_10894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 293 GPPAMSGGHGAGVVSKELRRWKFCHSSVRSQVQQDGG 183
G A+S G G+G VSKE+ W+ + + +GG
Sbjct: 6 GSGAVSTGGGSGSVSKEILIWRRPRGDLAMALSTEGG 42
>SB_10891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 532 RKDLRC---CFGSQQPTKTPSEPPGHYQRRLRPHVWKQCDHC 648
R++ +C C+G + +P PP RL W+ CD C
Sbjct: 279 RRNHKCNNLCYGCGEQECSPLVPPAEQDHRLE---WQYCDEC 317
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 527 GFGRTSDAASGANNQQKRQVSLQVITNAVCARTFGNNVIIA--STLCVDGSNGRSTCSGD 700
G+GR G ++ +Q L V +++ C R V + S +C G G C GD
Sbjct: 201 GWGRL--VGGGQPSEILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGM-GMGGCQGD 257
Query: 701 SGG 709
SGG
Sbjct: 258 SGG 260
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,577,156
Number of Sequences: 59808
Number of extensions: 474049
Number of successful extensions: 2352
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2340
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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