Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0953
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015285-1|AAT94514.1|  141|Drosophila melanogaster GH17517p pro...    31   2.0  
AY071382-1|AAL49004.1|  137|Drosophila melanogaster RE41492p pro...    29   7.9  
AE014298-2964|AAF45382.2|  137|Drosophila melanogaster CG12656-P...    29   7.9  

>BT015285-1|AAT94514.1|  141|Drosophila melanogaster GH17517p
           protein.
          Length = 141

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 156 PAPPCPRHYRHRTPRTSAACSCW 88
           PAPP   HY+ RT  T   CSCW
Sbjct: 43  PAPPPASHYQ-RTLITGCPCSCW 64


>AY071382-1|AAL49004.1|  137|Drosophila melanogaster RE41492p
           protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 189 SRTRYA-FGVLPPAPPCPRHYRHRTPRTSAACS 94
           SR+R A F   PP  P  RH  H TP  +A  +
Sbjct: 31  SRSRCATFSRTPPTAPSSRHITHTTPSATATAN 63


>AE014298-2964|AAF45382.2|  137|Drosophila melanogaster CG12656-PA
           protein.
          Length = 137

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 189 SRTRYA-FGVLPPAPPCPRHYRHRTPRTSAACS 94
           SR+R A F   PP  P  RH  H TP  +A  +
Sbjct: 31  SRSRCATFSRTPPTAPSSRHITHTTPSATATAN 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,065,659
Number of Sequences: 53049
Number of extensions: 470788
Number of successful extensions: 1218
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)