Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0952
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ID23 Cluster: Mitochondrial carrier protein, putative...    34   3.4  
UniRef50_A2DXC1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_A0EDY1 Cluster: Chromosome undetermined scaffold_90, wh...    33   7.8  
UniRef50_A0CK89 Cluster: Chromosome undetermined scaffold_2, who...    33   7.8  
UniRef50_Q59W62 Cluster: Likely protein kinase; n=2; Candida alb...    33   7.8  

>UniRef50_Q8ID23 Cluster: Mitochondrial carrier protein, putative;
           n=1; Plasmodium falciparum 3D7|Rep: Mitochondrial
           carrier protein, putative - Plasmodium falciparum
           (isolate 3D7)
          Length = 576

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
 Frame = -2

Query: 385 YHNISVSLTNTNE*YKNTAS-NNKVR--NQLSRCVRTFAQRHKIFDHVHLRIRSSLQ*IN 215
           YHN  V++ N N   KNT +  NK++  NQ S C+     + K+    HL  R ++  +N
Sbjct: 67  YHNKKVAILNHNIILKNTTNVENKLKSNNQQSLCLTKNDDKTKL--RFHLVKRQNVTFLN 124

Query: 214 DPQSALTSERLHSTRHHVKLL*LLDIRY*HARPHLTN 104
             +   + + ++ +++ +  L  ++  + H  PH  N
Sbjct: 125 FKKKINSLKGINKSKNQINKLNKINHHHNHNHPHNNN 161


>UniRef50_A2DXC1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 485

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = -3

Query: 726 LKSSNIRLNMSYRNFRPTALPFNINGQGFNIIQ------TTFFCMFNILYSINFYYHSRD 565
           LK  N  ++ S  NF  T LPF+ +  G++I+       ++F C FN L   +  Y S+D
Sbjct: 84  LKGENFVISSSPMNFNKTELPFSEDSIGYSIMNDDVSSFSSFLCDFNEL-EFDVDYKSKD 142

Query: 564 R 562
           R
Sbjct: 143 R 143


>UniRef50_A0EDY1 Cluster: Chromosome undetermined scaffold_90, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_90,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 493

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = -3

Query: 363 SPTQMNDIKILHQTIRSAINSHAVFAHLHSVTKYLIMFT*EYDHLYNKLMTHKVP*LVKD 184
           S +++N   IL++ +    + H + A   + TK L  F     HL ++L+T K+P   K 
Sbjct: 62  SKSKLNWEDILNEFVTDREDQHLICAIWINKTKNLTTFEYLSQHLLHQLLTSKIPDNTKG 121

Query: 183 YIQQ 172
           Y+Q+
Sbjct: 122 YLQR 125


>UniRef50_A0CK89 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 563

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
 Frame = -2

Query: 628 NHFFLHVQHSLFHQFLLSQ*GPGENLKLQLHSMLVT*HSKLGQLIDSF---SIVKFFF*N 458
           ++F+L + H  F   L+    P +    ++ S     H+K   LI +F   +I KF F N
Sbjct: 273 DYFYLRLFHGKFISSLIKYFIPSQKFSQEMVSQKDERHTKQRNLIKNFAQSAIYKFLFNN 332

Query: 457 IDVNNIRK*HLPEIFLSVTLIFTLY 383
           + +NN ++    +IF  +  I  +Y
Sbjct: 333 L-INNYQEEKKKQIFSQLNKIMEIY 356


>UniRef50_Q59W62 Cluster: Likely protein kinase; n=2; Candida
           albicans|Rep: Likely protein kinase - Candida albicans
           (Yeast)
          Length = 1349

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = -2

Query: 361 TNTNE*YKNTASNNKVRNQLSRCVRTFAQRHKIFDHVHLRIRSSLQ*INDPQSALTSERL 182
           TN N   K+T+ NNKV    S+       R K   H+ +   +S Q  ++P +  T+ R 
Sbjct: 370 TNNNSPKKSTSFNNKVVRSGSKYSLNGTPRRKRASHISVSRPTSFQYKSNPGAGATANRN 429

Query: 181 HSTRHHV 161
              RH V
Sbjct: 430 SVARHSV 436


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,954,925
Number of Sequences: 1657284
Number of extensions: 11701561
Number of successful extensions: 24461
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24439
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)