Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0952
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   4.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.5  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 738 LYATLKSSNIRLNMSYRNFRPTALPFNIN 652
           + ++L +  I  N +Y N+    L +NIN
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKLYYNIN 331


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 343 YKNTASNNKVRNQLSRCVR 287
           Y+NT SNN  R + S  V+
Sbjct: 380 YQNTMSNNNQRTEWSATVK 398


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 343 YKNTASNNKVRNQLSRCVR 287
           Y+NT SNN  R + S  V+
Sbjct: 418 YQNTMSNNNQRTEWSATVK 436


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 150 NYWIFVINMRDRILLIS 100
           NY++F + + D +LLIS
Sbjct: 89  NYYLFSLAVSDLLLLIS 105


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 297 RES*LRTLLFDAVFLYHSFVLVSETEMLWYNVKINVTLRNISGK 428
           RES   T+ F +  L+   V ++     +  VK +   RNIS K
Sbjct: 75  RESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEK 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,712
Number of Sequences: 438
Number of extensions: 3688
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)