Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0951
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.4
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 27 2.4
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 27 3.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.1
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.2
SPBC21C3.04c |||mitochondrial ribosomal protein subunit L34|Schi... 26 4.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 5.5
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 5.5
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 9.6
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 25 9.6
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 25 9.6
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3
Query: 256 SNQVDSTPIAASVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVG 95
S+ STPI++S+ + +S + S GS+ KT +N+ G
Sbjct: 159 SSSSSSTPISSSITSSISSSASSSVSSSSASSSGSISSADAKTVSASSNSTISG 212
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = -1
Query: 483 GVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSA 304
G S+++ +T + +T T++ + SS T + TT + + P G +
Sbjct: 125 GGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGS 184
Query: 303 TSLSSSVTDNVRAQAEAIKWTRPQLP-PPLLMSQTKKLPRNCPTLGTPLT 157
+SLS+ +T V + + +P PP S T PT T T
Sbjct: 185 SSLSTPITPTVPPTST----SSTSIPIPPTSTSSTDTNSSPLPTTSTSCT 230
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = -1
Query: 504 TNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSRIQT 325
T+S++ ++A GV ++ N E T+ + + VT T GPS
Sbjct: 825 TSSSSTTSLAANKGVNSNSITSL-NLESTSSVTSTAYTTDSVT--STTALTSQGPSSSVV 881
Query: 324 GNPVGSATSLSSSV 283
+ + S TSLS+S+
Sbjct: 882 SSSLSSTTSLSTSI 895
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 99 TATLLLWTGVVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST 248
+AT WT + T+ + + SS A+ WS SS + + +T
Sbjct: 922 SATSSSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASAT 971
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 496 RVSTSLTVEPTNCTPPLFVTIVSLADYVTTSI 591
RV +L+ PTNC ++ VSL Y+T+++
Sbjct: 674 RVRGALSKFPTNCLRSVYSHTVSLMKYLTSAV 705
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 26.6 bits (56), Expect = 3.1
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -1
Query: 279 DNVRAQAEAIKWTRPQLPPPLLM 211
+N+ +Q W +P +PP +L+
Sbjct: 722 ENIHSQNSLFNWVKPYIPPTILL 744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/63 (39%), Positives = 29/63 (46%)
Frame = -2
Query: 452 P*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTT 273
P A S P PPS+ + + AP L A + PP PAG LPPA PA P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPL--PAGMPAAP--PLPPAA-PAPPPA 479
Query: 272 CAP 264
AP
Sbjct: 480 PAP 482
Score = 25.4 bits (53), Expect = 7.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 386 PALRFRAWLLPPHLGPAG---SKPV-TLLGLPPACRPALPTTCAPKLKQSSGLDP 234
PA+ R+ P LG A + PV T LPP+ P+LP + P L + P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 129 VLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVEST 248
VLPT T S VS SSL++F ST G +T
Sbjct: 244 VLPTSIITSTSTPVTVSSSSLSSFTPSYSTNLTTTGSTTT 283
>SPBC21C3.04c |||mitochondrial ribosomal protein subunit
L34|Schizosaccharomyces pombe|chr 2|||Manual
Length = 108
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 327 TGNPVGSATSLSSSVTDNVRAQAEAIKW 244
T NP +AT SS T N+ Q + ++W
Sbjct: 35 TRNPFNTATLYSSLPTMNIFGQMQQVRW 62
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 314 LGLPPACRPALPTTCAPKLKQSSGL 240
+ L P RPA+PT+ P++ SS +
Sbjct: 1351 MSLEPPVRPAVPTSPKPQIPDSSNV 1375
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 339 SRIQTGNPVGSATSLSSSV--TDNVRAQAEAIKWTRPQLPPPLLMSQTKKLPRNCPTL 172
+R +T +P+ ++ + T NV A + + T PPP+ S T P + P+L
Sbjct: 382 ARSETNSPIIENKEANNFLAPTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSL 439
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 375 VQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVRA 265
V G TTP + + + S SLSS+ TDN+ A
Sbjct: 146 VYGDSATTPAASEAQASSDILSSLASLSSASTDNLAA 182
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 538 PPLFVTIVSLADYVTTSIRLRTISALEVP 624
P L TI L DY T +R I+ EVP
Sbjct: 692 PYLQTTIHHLEDYATVGLRTLCIAMREVP 720
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 176 VGQFLGNFLVWLINNGGGNWGRVHLIASAWARTLSVTL 289
V Q LG+ WL++N NW L+ ++ A ++S+ L
Sbjct: 173 VVQALGHLSRWLVHNKSENWMFFILLNASSAISMSLYL 210
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,051,860
Number of Sequences: 5004
Number of extensions: 70232
Number of successful extensions: 228
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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