Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0951
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 64 1e-10
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 56 2e-08
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 48 7e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 46 3e-05
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_40390| Best HMM Match : BON (HMM E-Value=0.68) 31 0.62
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 30 1.4
SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27) 29 2.5
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 2.5
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 28 5.8
SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26) 28 5.8
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 5.8
SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 5.8
SB_39441| Best HMM Match : SERTA (HMM E-Value=3.4) 28 5.8
SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05) 28 5.8
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 5.8
SB_52928| Best HMM Match : PKD (HMM E-Value=0) 28 7.7
SB_47838| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 28 7.7
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_16872| Best HMM Match : ARM_1 (HMM E-Value=0) 28 7.7
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 66.9 bits (156), Expect = 1e-11
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Frame = +1
Query: 127 WSCQRSIQHCRQWSSQCRTVPWQLFGLAHQQRRRQLGSSP----LDCFSLGAHVVGNAGR 294
WS +I + Q ++ R V Q+ L + Q G++P L FSLGAH+ G GR
Sbjct: 649 WSRGATIPY-EQATANTRMVGAQITELI-KFLNNQTGNTPASFYLVGFSLGAHISGYVGR 706
Query: 295 Q---AGGRPNRVTGLDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDF 459
+ G + NR+TGLDPA + + L+ + +V+ +HTD L G H DF
Sbjct: 707 RIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTDMDLAGTPTVSGHIDF 766
Query: 460 YPNGGRNPQPGCR 498
YPNGG+ QPGCR
Sbjct: 767 YPNGGKK-QPGCR 778
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 71 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGN 232
IR AL+ D NVI DW A Y A VG + L+ +NN GN
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITE-LIKFLNNQTGN 684
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Frame = +1
Query: 193 QLFGLAHQQRRRQLGSSPLDCFSLGAHVVGNAGRQA---GGRPNRVTGLDPAGPRWGGNN 363
+L + ++ R+L + FS GAHV G GR+ G +R+T LDPA + ++
Sbjct: 175 RLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAMWFHKHH 234
Query: 364 Q--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGC 495
+ L+ + +V+ IHT GI I H DFYPNGG+ QPGC
Sbjct: 235 EDVRLDTSDALFVDVIHTSADY-GITSTIGHADFYPNGGKK-QPGC 278
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +1
Query: 256 FSLGAHVVGNAG---RQAGGRPNRVTGLDPAGPRWGGN--NQALNRNAGAYVEAIHTDGG 420
FSLGAH+ G G ++ G +R+TGLDPA + G + L+R +V+ IHT
Sbjct: 178 FSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTSY- 236
Query: 421 LLGIFDRIAHGDFYPNGGRNPQPGC 495
+ GI H DFYPNGG + Q GC
Sbjct: 237 VFGITAPHGHMDFYPNGGTS-QRGC 260
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 71 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLIN-NGGGNWGRVH 247
++ LL SD NVI+VDW A Y AV VG + F+ +++ +G G H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 248 LIASAWARTLSVTLDDRL 301
I + +S + RL
Sbjct: 175 SIGFSLGAHISGYVGQRL 192
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 328 LDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCRV 501
LDPAG + + L+ + +V+ +HTD G + H DFYPNGG+N QPGCR
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKN-QPGCR- 59
Query: 502 STSLTVEPTNCTPPLFVTIVSLADYVTTSI 591
+ P+N L V DY T SI
Sbjct: 60 --DIADGPSNA---LKCDHVRAHDYFTESI 84
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 2 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANG--LYNTAVNGVPS 175
G+ L +I+HG+ +GN + ++R LL NVI VDW+ A+G LY+ A
Sbjct: 21 GDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRV 80
Query: 176 VGQFLGNFLVWLINNGGGNWGRVHLIASAWARTLSVTLDDRL 301
VG L + + + RVHLI + ++ +RL
Sbjct: 81 VGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERL 122
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 259 SLGAHVVGNAGRQAGGRPNRVT 324
SLGAHV G AG + G+ R+T
Sbjct: 109 SLGAHVAGYAGERLSGKVGRIT 130
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2
Query: 2 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVG 181
G FVI HG+ +G+++ +R ALL D NV++ DW A+G+Y A VG
Sbjct: 100 GKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 35.5 bits (78), Expect = 0.038
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = -2
Query: 422 RPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKQSSG 243
R PS + S P+ RF + LP P+G P L P LP+ C P + SG
Sbjct: 374 RLPSRRLPSGRLPSRRFPSGRLPSRRLPSGRLPSRQLPSGPLPSGRLPSGCLPSRRLPSG 433
Query: 242 LDPNCRLRC 216
P+ RL C
Sbjct: 434 RLPSGRLPC 442
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -2
Query: 425 RRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPA--LPTTCAPKLKQ 252
RR PS W+ S P+ R + LP P+G P LP P+ LP+ C P +
Sbjct: 203 RRLPSGWLPSRRLPSRRLPSGRLPSRRLPSGRLPSG--RLPSRWLPSRRLPSGCLPSRRL 260
Query: 251 SSGLDPNCRL 222
SG P+ RL
Sbjct: 261 PSGRLPSGRL 270
>SB_40390| Best HMM Match : BON (HMM E-Value=0.68)
Length = 561
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 353 PHLGPAGSKPVTLLGLPPACRPALPTTC-APKLK-QSSGLDPNCRLR 219
P GP+ P T L P RP PT C P + ++GL PN LR
Sbjct: 106 PCYGPSAKPPATALVPNPLLRPQCPTPCYGPSAQPPATGLVPNPLLR 152
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 506 PLSQSSLRIVRLHCSSQSFRWQTM*QPQSGSEQSVLWRYLQHG*CRI 646
P + L+I++L+ + S R TM Q+GS +SV WR LQ R+
Sbjct: 1404 PTPNTILKIIQLYETKNS-RHSTMVVGQTGSGKSVTWRVLQSAMTRL 1449
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 444 NAVKNTEK-TTVGVDCLHISSCVTVQGLVVTTPPGPSRIQTGNPVGSATSLSSSVTDNVR 268
NA N++ TTV T T P + + TG P+G+ T + + +
Sbjct: 43 NATTNSQNITTVAPITTMAPDTTTAAPFTTTIAPATTALPTGTPIGTPTGIPTGILTGTA 102
Query: 267 AQA 259
+QA
Sbjct: 103 SQA 105
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = -2
Query: 476 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGP--AGSKP---VTLL 312
+P L +P M + P PP++ +T P L LPP P A + P VT
Sbjct: 129 IPFLATTAPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTS 188
Query: 311 GLPPACRPALPTTCAPKLKQSSGLDP 234
LPP P L TT + +S L P
Sbjct: 189 PLPPPTIPFLATTTPLLMVTTSPLPP 214
>SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27)
Length = 770
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/99 (30%), Positives = 44/99 (44%)
Frame = -1
Query: 522 LDCERGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPG 343
+ + GT++ T L V VG + A + KTT G C + +C+ VT PP
Sbjct: 403 ISSKEGTHATTFLVV---VGHGLPGIQATRPRIKTTAGSRC--VLNCI------VTLPPR 451
Query: 342 PSRIQTGNPVGSATSLSSSVTDNVRAQAEAIKWTRPQLP 226
S I + N GS +S +R + A K T P +P
Sbjct: 452 TSVILSWNRNGSLMEWTSRGRQYLRDLSRAEKRTEPLVP 490
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 25 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSCQRSIQHCRQWSSQCRTVPWQL 198
CP LR H PP GR+R+ R+C G+A C+ S+ S +P
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVA--CECSLTAITVGSRTSVHLPPLC 90
Query: 199 FGLAHQQRRRQLGSSPLDCFSLGAHVVG 282
+G R G +C SL A V+G
Sbjct: 91 WGCVRVFIYRHYGGVAYEC-SLTAIVLG 117
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -3
Query: 484 GGFCHRWGKSHHEQCGQ----KYREDHRRCG 404
GG C R+G H QC + K+ E+H CG
Sbjct: 256 GGLCSRFGTQHSCQCARGYSGKHCEEHSPCG 286
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 359 LPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKL 258
LPP + P P +PP C P P C+ L
Sbjct: 753 LPPKVTPKPPAPPQFAPVPPPCAPIPPMPCSAPL 786
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = -2
Query: 359 LPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKQSSGLDPNCRLRC 216
LPP P +KP T + P P P G+D C+ C
Sbjct: 509 LPPTNAPVTNKPATDAPVVPTSPPTGGCVAVPPYNTQPGMDAWCQSMC 556
>SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26)
Length = 363
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -1
Query: 309 SATSLSSSVTDNVRAQAEAIKWTRPQLPPPLLMSQTKKLPRNCPTLG 169
S + SS++T +R +++ RP+L PP + + L N P+ G
Sbjct: 249 SPSPRSSAITRLMRESPAPMEFKRPRLTPPEKYDENQPLASNQPSSG 295
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 264 QAEAIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQS 118
Q+ WT PQ PP+ ++ + P P P+ + R RQS
Sbjct: 59 QSRIPTWTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSFRGQRQS 107
>SB_43150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 616
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 317 LLGLPPACRPALPTTCAPKLKQSSGLDP 234
L G P + A P+TC K +QSS +DP
Sbjct: 29 LTGDPCTWKIASPSTCVEKEQQSSAMDP 56
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 211 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 50
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_39441| Best HMM Match : SERTA (HMM E-Value=3.4)
Length = 463
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 570 CQRNDCDEQWRRTIRRLDCERGTNSATR-LGVSATVGVKVTMSNAVKNTE 424
CQ + +W R + R+D + G + R G + T K+ + K T+
Sbjct: 93 CQHGSTESKWSRFVERVDMDDGNDDDIRWQGFAVTTDKKLFEARPAKRTK 142
>SB_29783| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1395
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 317 LLGLPPACRPALPTTCAPKLKQSSGLDP 234
L G P + A P+TC K +QSS +DP
Sbjct: 29 LTGDPCTWKIASPSTCVEKEQQSSAMDP 56
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = -1
Query: 294 SSSVTDNVRAQAEAIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQ-- 121
++ + D + A EA+K + +L + QT+ L C T+G L+ + P A+P Q
Sbjct: 1006 NTRLEDVIIAYEEALKTAQNEL----CVIQTE-LALLCSTIGQDLSKEILNPAAQPSQED 1060
Query: 120 -STTITLQSETASK 82
+TT+T+ E K
Sbjct: 1061 AATTVTVTEEETRK 1074
>SB_52928| Best HMM Match : PKD (HMM E-Value=0)
Length = 1624
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 326 PVTLLGLP-PACRPALPTTCAPKLKQSSGLDPNCRLR 219
P+ ++GL AC L T C ++K G + NC L+
Sbjct: 321 PIKIIGLKVSACPCVLGTLCEIQVKWEQGFEFNCELK 357
>SB_47838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -2
Query: 362 LLPPHLGPAGSKPVTLLGLPPACRPAL--PTTCAPKLKQSSGLDPNCRLR 219
L P HL GS+P+T + L A T AP L +S L CRLR
Sbjct: 4 LRPYHLESTGSRPITEVKLSRARSVVYGHTTEKAPVLVRSPKLSSFCRLR 53
>SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 276 NVRAQAEAIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 130
+V + + +R +LPPPL Q TL T +TA + P+ R
Sbjct: 183 HVAGEKRLHRLSRSRLPPPLTNPQVSGTKHAKATLTTKITASTWLPILR 231
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 271 HVVGNAGRQAGGRPNRVTGLDPAG--PRWGGNNQALNRNA 384
H GNAG Q R V+ P G P +QA NRNA
Sbjct: 106 HQCGNAGTQTRTRTKTVSEACPGGRCPYHFSESQACNRNA 145
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -1
Query: 243 TRPQLPPPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 130
T+ PPL + KL PR CPT G PL VL RP R
Sbjct: 15 TKAGTGPPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 207 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 64
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_16872| Best HMM Match : ARM_1 (HMM E-Value=0)
Length = 401
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 342 PSRIQTGNPVGSATSLSSSVTDNVRAQAEAIKWTRPQLPPPLLMSQTKKLPRNCPTL-GT 166
P+R+Q+ +P G TS S++ T N+R P PPP + Q L + G
Sbjct: 209 PTRVQS-SP-GPRTSSSAAETPNIRPATAVPNAPPPATPPPRQVVQLSDLQNILSNIQGV 266
Query: 165 PLTAVL 148
L+ VL
Sbjct: 267 DLSRVL 272
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,686,700
Number of Sequences: 59808
Number of extensions: 624771
Number of successful extensions: 2129
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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