Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0949
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   121   1e-27
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   121   1e-27
Y11820-1|CAA72505.1|  347|Drosophila melanogaster S-adenosylmeth...    28   10.0 
Y11216-1|CAA72102.1|  347|Drosophila melanogaster S-adenosylmeth...    28   10.0 
BT021946-1|AAX51651.1|  347|Drosophila melanogaster LD20439p pro...    28   10.0 
AE014134-1843|AAN10744.1|  138|Drosophila melanogaster CG5029-PB...    28   10.0 
AE014134-1842|AAF52917.1|  347|Drosophila melanogaster CG5029-PA...    28   10.0 

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  121 bits (291), Expect = 1e-27
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +1

Query: 268 YRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDLPQSLQDLGGW 447
           YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+LPQ LQ+LGGW
Sbjct: 97  YRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWELPQKLQELGGW 156

Query: 448 MNPLIVDWFEDYARVVFSLFGIELK 522
            NP I+  F+DYAR+V  ++G  +K
Sbjct: 157 TNPEIIPLFKDYARLVLEMYGDRVK 181



 Score =  101 bits (241), Expect = 1e-21
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +2

Query: 56  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 235
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 236 IEMATEL 256
           ++M  EL
Sbjct: 86  VQMVKEL 92


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  121 bits (291), Expect = 1e-27
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +1

Query: 268 YRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDLPQSLQDLGGW 447
           YRFSLSWPR+MP G+ N +S  G KYY+NLID LL   I P+VTI+HW+LPQ LQ+LGGW
Sbjct: 97  YRFSLSWPRIMPGGYMNHVSTAGIKYYSNLIDELLRYNITPMVTIYHWELPQKLQELGGW 156

Query: 448 MNPLIVDWFEDYARVVFSLFGIELK 522
            NP I+  F+DYAR+V  ++G  +K
Sbjct: 157 TNPEIIPLFKDYARLVLEMYGDRVK 181



 Score =  101 bits (241), Expect = 1e-21
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +2

Query: 56  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 235
           FP  F +G  S+SYQ+EG WN  DKGESIWD L HT PE I+D +NGDV+ DSYH W+RD
Sbjct: 26  FPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHTHPEKIVDRSNGDVSADSYHQWKRD 85

Query: 236 IEMATEL 256
           ++M  EL
Sbjct: 86  VQMVKEL 92


>Y11820-1|CAA72505.1|  347|Drosophila melanogaster
           S-adenosylmethionine decarboxylase protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 555 ATMFITLAEWLLLFSSLTWPLMCVLSMFCLAHAKAWRI 668
           ++MF++   W+L     T PL C+  +  LA A  + +
Sbjct: 66  SSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNV 103


>Y11216-1|CAA72102.1|  347|Drosophila melanogaster
           S-adenosylmethionine decarboxylase protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 555 ATMFITLAEWLLLFSSLTWPLMCVLSMFCLAHAKAWRI 668
           ++MF++   W+L     T PL C+  +  LA A  + +
Sbjct: 66  SSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNV 103


>BT021946-1|AAX51651.1|  347|Drosophila melanogaster LD20439p
           protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 555 ATMFITLAEWLLLFSSLTWPLMCVLSMFCLAHAKAWRI 668
           ++MF++   W+L     T PL C+  +  LA A  + +
Sbjct: 66  SSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNV 103


>AE014134-1843|AAN10744.1|  138|Drosophila melanogaster CG5029-PB,
           isoform B protein.
          Length = 138

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 555 ATMFITLAEWLLLFSSLTWPLMCVLSMFCLAHAKAWRI 668
           ++MF++   W+L     T PL C+  +  LA A  + +
Sbjct: 66  SSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNV 103


>AE014134-1842|AAF52917.1|  347|Drosophila melanogaster CG5029-PA,
           isoform A protein.
          Length = 347

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 555 ATMFITLAEWLLLFSSLTWPLMCVLSMFCLAHAKAWRI 668
           ++MF++   W+L     T PL C+  +  LA A  + +
Sbjct: 66  SSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNV 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,334,197
Number of Sequences: 53049
Number of extensions: 704922
Number of successful extensions: 1540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)