Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0949
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...    83   1e-16
AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...    78   5e-15
L10986-12|AAA28011.1|  197|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate cyc...    27   9.1  
AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical ...    27   9.1  

>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +1

Query: 256 GLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDLPQSLQD 435
           G+  YRFS+SW R++P G    I+EDG ++Y ++   L D GIEP+VT+FH+D+P S+ D
Sbjct: 73  GVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHFDMPLSIYD 132

Query: 436 LG-GWMNPLIVDWFEDYARVVFSLFG 510
            G  W+N    + FE +A + F  FG
Sbjct: 133 NGTSWLNKENCEHFEKFADLCFQKFG 158



 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 20/67 (29%), Positives = 41/67 (61%)
 Frame = +2

Query: 56  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 235
           FP  F+   A+A+YQ+EGA N+  +G S WD  + ++   I D ++ D++C+    ++ D
Sbjct: 7   FPKNFQLATATAAYQIEGAKNLDGRGFSTWDS-IRSENGRIHDNSDPDLSCEGRLKYKED 65

Query: 236 IEMATEL 256
           + + +++
Sbjct: 66  VALLSKI 72


>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +1

Query: 256 GLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHWDLPQSLQD 435
           G+  YRFS+SW R++P G  + I+E+G K+Y +L   L +  IEP+VT+FH+D+P ++ D
Sbjct: 73  GVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHFDMPLAIYD 132

Query: 436 LG-GWMNPLIVDWFEDYARVVFSLFG 510
            G  W+N    + FE +A + F  FG
Sbjct: 133 NGTAWLNRENCEHFEKFADLCFQKFG 158



 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 23/67 (34%), Positives = 42/67 (62%)
 Frame = +2

Query: 56  FPPGFKFGAASASYQVEGAWNVSDKGESIWDRLVHTKPEAIMDLTNGDVTCDSYHLWERD 235
           FP  FK   A+A+YQ+EGA +++ +G S WD  +  +P  I+D ++ D++CD    ++ D
Sbjct: 7   FPKNFKLATATAAYQIEGAKDLNGRGFSTWD-AIRLEPGRILDNSDPDLSCDGLLKYKED 65

Query: 236 IEMATEL 256
           + +  E+
Sbjct: 66  VALLAEI 72


>L10986-12|AAA28011.1|  197|Caenorhabditis elegans Hypothetical
           protein F10E9.1 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = +3

Query: 525 WVSINELYR--FATMFITLAEWLLLFSSLTWPLMCVLSM--FCLAHAKAWR 665
           W+S++ ++   F+  FI  A ++  FS +T  +  +LS+  FC A  K W+
Sbjct: 35  WISVSTIWYIFFSAWFIRAAGYI--FSGITVSIAFLLSIAFFCEADGKGWK 83


>Z99942-9|CAB17073.3|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +1

Query: 232 RHRNGNGAGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHW 411
           +H N     L    F  ++P  M      KI + G++ YN++   LL  G  PL+ IF  
Sbjct: 210 QHSNNYKIRLTHMDFISTFPYHMVVDQDCKIVQVGRELYNHIPKDLLSVG-TPLMRIFEV 268

Query: 412 DLPQ 423
             PQ
Sbjct: 269 TRPQ 272


>AY652945-1|AAT73712.1|  675|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +1

Query: 232 RHRNGNGAGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHW 411
           +H N     L    F  ++P  M      KI + G++ YN++   LL  G  PL+ IF  
Sbjct: 210 QHSNNYKIRLTHMDFISTFPYHMVVDQDCKIVQVGRELYNHIPKDLLSVG-TPLMRIFEV 268

Query: 412 DLPQ 423
             PQ
Sbjct: 269 TRPQ 272


>AL008867-4|CAD56232.2|  675|Caenorhabditis elegans Hypothetical
           protein C46E1.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = +1

Query: 232 RHRNGNGAGLHFYRFSLSWPRLMPTGFSNKISEDGQKYYNNLIDGLLDKGIEPLVTIFHW 411
           +H N     L    F  ++P  M      KI + G++ YN++   LL  G  PL+ IF  
Sbjct: 210 QHSNNYKIRLTHMDFISTFPYHMVVDQDCKIVQVGRELYNHIPKDLLSVG-TPLMRIFEV 268

Query: 412 DLPQ 423
             PQ
Sbjct: 269 TRPQ 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,124,741
Number of Sequences: 27780
Number of extensions: 344204
Number of successful extensions: 794
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)