Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0948
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0202 - 1638978-1639571 38 0.008
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 37 0.013
03_06_0587 - 34921535-34922041,34922579-34922689 36 0.030
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 35 0.053
02_01_0158 - 1103461-1104186 35 0.053
05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-56... 34 0.12
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 33 0.21
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 33 0.28
02_04_0577 - 24011542-24011906,24012285-24012385,24013029-240132... 33 0.28
12_02_0371 - 18187169-18188386 32 0.37
10_02_0125 - 5537541-5538758 32 0.37
05_03_0201 - 9762563-9762843,9763037-9763919,9763988-9764036,980... 32 0.37
04_04_0086 - 22679233-22680450 32 0.37
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 32 0.49
04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318 31 0.65
08_01_0688 - 6072815-6073918 31 0.86
07_01_1127 + 10456895-10457388,10457488-10458112 31 0.86
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.86
04_01_0252 - 3329712-3331061 31 0.86
10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296 31 1.1
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147... 31 1.1
09_02_0546 - 10454404-10455687 30 1.5
06_01_1059 + 8512335-8513444 30 1.5
03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594 30 1.5
02_02_0357 + 9360108-9360754,9363732-9364137 30 1.5
11_03_0149 + 10787332-10787454,10787776-10788529,10790406-107904... 30 2.0
02_03_0327 + 17770766-17770819,17770913-17771380 30 2.0
11_05_0050 + 18665251-18665613,18667280-18667744,18668548-186690... 29 2.6
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 29 2.6
10_02_0188 - 6473353-6473432,6473619-6474816 29 4.6
06_01_0789 - 5901888-5902940,5903685-5903824,5904606-5904665,590... 28 6.1
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 28 6.1
03_06_0481 - 34222012-34222287,34222371-34222439 28 6.1
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 28 6.1
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 8.0
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 28 8.0
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 28 8.0
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 28 8.0
05_01_0553 + 4849535-4849553,4850727-4851913 28 8.0
02_02_0741 + 13590883-13591582,13591955-13592250 28 8.0
01_05_0645 - 23899579-23904483 28 8.0
>08_01_0202 - 1638978-1639571
Length = 197
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECTQGG 624
S CYKC GH AR+C+QGG
Sbjct: 134 SRACYKCGEEGHMARDCSQGG 154
Score = 31.1 bits (67), Expect = 0.86
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
CY C TGH AREC
Sbjct: 179 CYNCGETGHIAREC 192
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC-TQGGVVSRDSGFNRQREK 666
S S CY+C TGHFAREC + G SG R R +
Sbjct: 85 SESKCYECGETGHFARECRLRIGSGGLGSGRRRSRSR 121
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQG 621
CYKC + GHFAREC G
Sbjct: 128 CYKCGKPGHFARECPSG 144
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 35.1 bits (77), Expect = 0.053
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC-TQGGVVSRDSGFNRQREK 666
S CY+C TGHFAREC + G SG R R +
Sbjct: 84 SEMKCYECGETGHFARECRLRIGPGGLGSGKRRSRSR 120
>02_01_0158 - 1103461-1104186
Length = 241
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQG---GVVSRDSGFNRQREKCFKC 678
C+KC +GH AR+C G GV G CFKC
Sbjct: 126 CFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKC 164
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREK-CFKC 678
CY C TGH AR+C GG F ++ C+ C
Sbjct: 193 CYNCGETGHLARDCYNGGGGGGGGRFGGGGDRSCYNC 229
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
C+KC GH AR+C G G C+ C T
Sbjct: 161 CFKCGEMGHMARDCFNSGGGGGGGGGGGGGGACYNCGET 199
Score = 27.9 bits (59), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
CY C GH AR+C
Sbjct: 226 CYNCGEAGHIARDC 239
>05_01_0084 + 562119-562411,562854-562902,563151-563162,563194-563327,
563716-566278
Length = 1016
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 10/41 (24%)
Frame = +1
Query: 565 SVCYKCNRTGHFAREC----------TQGGVVSRDSGFNRQ 657
S C+KC + GHFAR+C T G V+ G+NRQ
Sbjct: 970 SECFKCKQPGHFARDCPGQSTGAQHQTYGNNVAASRGYNRQ 1010
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 562 SSVCYKCNRTGHFAREC 612
SS CYKC + GH+AR+C
Sbjct: 923 SSECYKCKQPGHYARDC 939
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNR 684
C+KC + GHF+R+C V G +CFKC +
Sbjct: 949 CFKCKQPGHFSRDCP----VQSTGG-----SECFKCKQ 977
>12_02_0792 - 23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 33.1 bits (72), Expect = 0.21
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECTQ 618
S +CYKC ++GH +R+C +
Sbjct: 999 SKICYKCKKSGHLSRDCPE 1017
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 32.7 bits (71), Expect = 0.28
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 318 YLFFYILIMVVNLCCIYFIHTLCWCEIKCLMD 413
Y FF++ + L C+Y + CW +++ +MD
Sbjct: 202 YRFFFMFVSSTTLLCVY-VFAFCWVDLRIIMD 232
>02_04_0577 -
24011542-24011906,24012285-24012385,24013029-24013287,
24014176-24014264,24015331-24015419
Length = 300
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC-TQGGVVSRDSGFNRQREK 666
S CY+C GHFAREC + G SG R R +
Sbjct: 84 SDMKCYECGEPGHFARECRLRIGSGGLGSGRRRSRSR 120
>12_02_0371 - 18187169-18188386
Length = 405
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>10_02_0125 - 5537541-5538758
Length = 405
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>05_03_0201 -
9762563-9762843,9763037-9763919,9763988-9764036,
9806710-9807680
Length = 727
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQ 618
+S +C+ C+ GH+AREC Q
Sbjct: 98 ASIICFMCDEQGHYARECPQ 117
>04_04_0086 - 22679233-22680450
Length = 405
Score = 32.3 bits (70), Expect = 0.37
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GHF+R+C Q
Sbjct: 345 AKKTLICYNCKEPGHFSRDCPQ 366
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 31.9 bits (69), Expect = 0.49
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
C+KC R GH+AREC
Sbjct: 128 CFKCGRAGHWAREC 141
>04_02_0022 - 8645919-8646697,8646819-8646875,8653799-8654318
Length = 451
Score = 31.5 bits (68), Expect = 0.65
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 499 VERCYISVLSAQEFSKPIA-MSSSVCYKCNRTGHFAREC 612
+E+ VL Q+ S + VC+ C + GHFAREC
Sbjct: 368 IEQANQPVLVQQDQSNNSSGREQQVCFNCYKPGHFAREC 406
>08_01_0688 - 6072815-6073918
Length = 367
Score = 31.1 bits (67), Expect = 0.86
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 568 VCYKCNRTGHFAREC 612
VC+ C + GHFAREC
Sbjct: 308 VCFNCYKPGHFAREC 322
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GH++R+C Q
Sbjct: 312 AKKTLICYNCKEPGHYSRDCLQ 333
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GH++R+C Q
Sbjct: 204 AKKTLICYNCKEPGHYSRDCLQ 225
>04_01_0252 - 3329712-3331061
Length = 449
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GH++R+C Q
Sbjct: 389 AKKTLICYNCKEPGHYSRDCLQ 410
>10_08_0817 - 20792817-20793360,20794061-20794156,20795193-20795296
Length = 247
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSG 645
VC CN +GH AREC + ++ G
Sbjct: 161 VCNLCNVSGHLARECPKSDAINERGG 186
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFAREC 612
P + +C C R GHFAR+C
Sbjct: 33 PSRFPNDLCNNCKRPGHFARDC 54
Score = 29.5 bits (63), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQG 621
S VC CN+ GH +R+C G
Sbjct: 195 SDVVCRACNQVGHMSRDCMAG 215
Score = 28.7 bits (61), Expect = 4.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECT 615
+ +C C ++GH AREC+
Sbjct: 94 NEGICRNCGKSGHIARECS 112
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSR 636
+C+ C GH A EC G ++ R
Sbjct: 219 ICHNCGGRGHMAYECPSGRLMDR 241
>02_05_0839 -
32113992-32114210,32114321-32114484,32114612-32114708,
32115822-32115944,32116770-32117141
Length = 324
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
CYKC R GH++R+C
Sbjct: 9 CYKCGRPGHWSRDC 22
>09_02_0546 - 10454404-10455687
Length = 427
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQ 618
+S +C+ C+ GH+AR C Q
Sbjct: 98 ASIICFMCDEQGHYARNCPQ 117
>06_01_1059 + 8512335-8513444
Length = 369
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 568 VCYKCNRTGHFAREC 612
VC+ C GHFAREC
Sbjct: 312 VCFNCYNPGHFAREC 326
>03_05_0702 - 26934736-26935551,26937494-26937538,26938484-26938594
Length = 323
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGG 624
C++C R GH+AR+C G
Sbjct: 131 CFECGRAGHWARDCPNPG 148
>02_02_0357 + 9360108-9360754,9363732-9364137
Length = 350
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQ 618
A + +CY C GH++R+C Q
Sbjct: 290 AKKTLICYNCKGPGHYSRDCLQ 311
>11_03_0149 +
10787332-10787454,10787776-10788529,10790406-10790473,
10791254-10791421
Length = 370
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 526 SAQEFSKPIAMSSSVCYKCNRTGHFARECTQ 618
+A + P + +C+ C+ GH+A C Q
Sbjct: 255 TAMTYKAPKRVLGVICFNCHEEGHYANRCPQ 285
>02_03_0327 + 17770766-17770819,17770913-17771380
Length = 173
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQ 618
+C+ C GHFAREC++
Sbjct: 119 LCFNCYEPGHFARECSK 135
>11_05_0050 +
18665251-18665613,18667280-18667744,18668548-18669037,
18669115-18669143
Length = 448
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFAREC 612
P S+ CY+C GH++R C
Sbjct: 396 PFTPRSNPCYRCGEDGHWSRNC 417
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 553 AMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
A S C+ C GH+ R CT G +R G + +C +
Sbjct: 104 AHGSDHCFNCGMEGHWHRNCTAGDWTNRCYGCGERGHILRECKNS 148
>10_02_0188 - 6473353-6473432,6473619-6474816
Length = 425
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQ 618
+S++C+ C+ GH+ARE Q
Sbjct: 98 ASNICFTCDEQGHYARERPQ 117
>06_01_0789 -
5901888-5902940,5903685-5903824,5904606-5904665,
5904794-5904854
Length = 437
Score = 28.3 bits (60), Expect = 6.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 568 VCYKCNRTGHFAREC 612
VCYKC+ GH R C
Sbjct: 235 VCYKCHEFGHIRRNC 249
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCN 681
CY+C GH R C ++S N +RE+ + C+
Sbjct: 126 CYRCGERGHIERNC-------QNSPRNLRRERSYSCS 155
>03_06_0481 - 34222012-34222287,34222371-34222439
Length = 114
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNR 684
VC CN +GH AR C + + S G + C C +
Sbjct: 36 VCNLCNVSGHLARNCQKTTISSEIQGGPFRDITCRLCGK 74
>01_01_0419 -
3146851-3147339,3148428-3148663,3148847-3149793,
3150258-3150356,3151128-3151501
Length = 714
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 532 QEFSKPIAMSSSVCYKCNRTGHFARECTQ 618
++F S C++C + GHFA EC +
Sbjct: 663 KKFRGKFDKSKIECHRCGKFGHFADECDE 691
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGV 627
++CYKC GH A C + V
Sbjct: 484 TICYKCGLKGHIANRCFKSKV 504
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 318 YLFFYILIMVVNLCCIYFIHTLCWCEIKCLMD 413
Y FFY+ + L C+Y + CW I + D
Sbjct: 165 YRFFYMFVFSTTLLCLY-VFGFCWVYIVKIRD 195
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 318 YLFFYILIMVVNLCCIYFIHTLCWCEI 398
Y FFY+ + L C+Y + CW I
Sbjct: 280 YRFFYMFVFSTTLLCLY-VFAFCWVYI 305
>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
Length = 1275
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGV 627
++CYKC GH A C + V
Sbjct: 803 TICYKCGLKGHIANRCFKSKV 823
>05_01_0553 + 4849535-4849553,4850727-4851913
Length = 401
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC 612
S+ VCY C GHF +C
Sbjct: 135 SARVCYVCKEPGHFIADC 152
>02_02_0741 + 13590883-13591582,13591955-13592250
Length = 331
Score = 27.9 bits (59), Expect = 8.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 562 SSVCYKCNRTGHFAREC 612
S+ CY C GH+ R C
Sbjct: 90 SATCYDCGEQGHYVRNC 106
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGV 627
++CYKC GH A C + V
Sbjct: 723 TICYKCGLKGHIANRCFKSKV 743
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,621,701
Number of Sequences: 37544
Number of extensions: 280659
Number of successful extensions: 842
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -