Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0948
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 46 2e-05
SB_34761| Best HMM Match : zf-CCHC (HMM E-Value=4.9e-08) 41 8e-04
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21) 31 0.88
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 31 0.88
SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21) 31 0.88
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 31 0.88
SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24) 31 1.2
SB_6211| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_27219| Best HMM Match : Cad (HMM E-Value=4) 30 2.0
SB_52753| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06) 30 2.0
SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074) 30 2.0
SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05) 30 2.0
SB_55324| Best HMM Match : zf-CCHC (HMM E-Value=0.00014) 29 3.6
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 29 3.6
SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18) 29 3.6
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 29 3.6
SB_35115| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06) 29 3.6
SB_20451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 28 6.2
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 28 6.2
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 28 6.2
SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36) 28 6.2
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 6.2
SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_25683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18) 28 6.2
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_12829| Best HMM Match : zf-CCHC (HMM E-Value=6e-06) 28 6.2
SB_6083| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_5734| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 6.2
SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24) 28 6.2
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 28 6.2
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_25715| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_24493| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_23207| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 28 6.2
SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 28 6.2
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_2338| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 28 6.2
SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_46097| Best HMM Match : zf-CCHC (HMM E-Value=7.2e-05) 28 8.2
SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12) 28 8.2
SB_31294| Best HMM Match : 7tm_1 (HMM E-Value=7.2) 28 8.2
SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19) 28 8.2
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
C+KCN +GHFAREC G G C+KCN T
Sbjct: 489 CFKCNESGHFARECPNSGGGGGGFGGGSSGSTCYKCNET 527
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC--TQGGVVSRDSGFNRQREKCFKCNRT 687
S S CYKCN TGHFAREC + G CFKC +T
Sbjct: 517 SGSTCYKCNETGHFARECPNAESNGGGFGGGGGSSDSTCFKCQQT 561
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC--TQGGVVSRDSGFNRQREKCFKCNRT 687
S S CYKCN TGHFAREC + G CFKC +T
Sbjct: 599 SGSTCYKCNETGHFARECPNAESSGGGFGGGGGSSDSTCFKCQQT 643
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
S C+KCN GHFAREC + DSG N KCFKCN +
Sbjct: 463 SRTCHKCNEEGHFARECP-----NADSGGN----KCFKCNES 495
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQ 657
S S C+KC +TGHFAREC + F R+
Sbjct: 551 SDSTCFKCQQTGHFARECPNESAAGENGHFARE 583
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQGGVVSRD 639
S S C+KC +TGHFAREC D
Sbjct: 633 SDSTCFKCQQTGHFARECPNESAAGED 659
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 592 GHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
GHFAREC G C+KCN T
Sbjct: 578 GHFARECPNAESNGGGFGGGSSGSTCYKCNET 609
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC--TQGGVVSRDSGFNRQREKCFKCNRT 687
S S CYKCN TGHFAREC + G CFKC +T
Sbjct: 22 SGSTCYKCNETGHFARECPNAESSGGGFGGGGGSSDSTCFKCQQT 66
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECTQGGVVSRD 639
S S C+KC +TGHFAREC D
Sbjct: 56 SDSTCFKCQQTGHFARECPNESAAGED 82
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +1
Query: 595 HFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
HFAREC G C+KCN T
Sbjct: 2 HFARECPNAESNGGGFGGGSSGSTCYKCNET 32
>SB_34761| Best HMM Match : zf-CCHC (HMM E-Value=4.9e-08)
Length = 59
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 550 IAMSSSV-CYKCNRTGHFARECTQGGVVSRDSG 645
+ MSSS CYKC +TGHFAR+CT+ SG
Sbjct: 2 VKMSSSKDCYKCGKTGHFARDCTEASPGGGGSG 34
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 502 ERCYISVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQ----GGVVSRDSGFNRQREK 666
+R + + +P S+ CY+C R GHFAR+CT+ GG G R R +
Sbjct: 66 QRARVELAKGPSRGRPRQASNEKCYECGRVGHFARDCTRRRYGGGRSPSPRGRRRSRSR 124
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 502 ERCYISVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQ---GGVVSRDSGFNRQRE 663
+R + + +P S+ CY+C R GHFAR+CT+ GG S + R+R+
Sbjct: 96 QRVRVELAKGPSRGRPRMGSNEKCYECGRVGHFARDCTRRRYGGGRSFSNSPKRERQ 152
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 523 LSAQEFSKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSG 645
+SA+ + + CYKC + GHFAREC G R G
Sbjct: 186 MSAERGDRGDRVEGDGCYKCGKYGHFARECPDAGGSGRGRG 226
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
S C+KC GHFAREC G Q + C KC T
Sbjct: 379 SGTCHKCGEVGHFARECPTG---------RGQSDTCHKCGET 411
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 562 SSVCYKCNRTGHFAREC 612
S C+KC TGH++REC
Sbjct: 402 SDTCHKCGETGHYSREC 418
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 35.9 bits (79), Expect = 0.031
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFAREC 612
S VCY+C TGHFAR+C
Sbjct: 74 SRDVCYRCQETGHFARDC 91
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
VCY+CN +GHFAR+C R+ C++C T
Sbjct: 55 VCYRCNMSGHFARDCDA----------ESSRDVCYRCQET 84
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSGFNRQRE-KCFKCN 681
VCY C + GH +R+C + SG +R R+ C++CN
Sbjct: 27 VCYSCGKKGHISRDCK-----NPSSGGSRNRDVVCYRCN 60
Score = 34.3 bits (75), Expect = 0.094
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 571 CYKCNRTGHFARECT 615
CY+C ++GHFAR+CT
Sbjct: 123 CYRCGKSGHFARDCT 137
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQ 618
CYKC TGH R+C +
Sbjct: 142 CYKCGNTGHIRRDCPE 157
>SB_19681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFARECT 615
KP C+KCN+ GH AR CT
Sbjct: 365 KPRRKGDITCFKCNQQGHIARNCT 388
>SB_21876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFARECT 615
KP C+KCN+ GH AR CT
Sbjct: 384 KPRRNGDITCFKCNQQGHIARICT 407
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 562 SSVCYKCNRTGHFAREC 612
S+ CY C GHFAREC
Sbjct: 624 SNSCYDCGEEGHFAREC 640
>SB_47014| Best HMM Match : rve (HMM E-Value=6.8e-21)
Length = 752
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSGFNRQR 660
VC KCN+ HFAR C + R + NR +
Sbjct: 106 VCSKCNKKNHFARVCYPLVKIIRRASLNRSQ 136
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS 642
+ I M +CY C + GH A +C G +S
Sbjct: 296 REILMQKKLCYNCTKGGHMATKCKAGNCAKCNS 328
>SB_144| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 887
Score = 31.1 bits (67), Expect = 0.88
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRDSGFNRQR 660
VC KCN+ HFAR C + R + NR +
Sbjct: 43 VCSKCNKKNHFARVCYPLVKIIRRASLNRSQ 73
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 31.1 bits (67), Expect = 0.88
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS 642
+ I M +CY C + GH A +C G +S
Sbjct: 190 REILMQKKLCYNCTKGGHMATKCKAGNCAKCNS 222
>SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24)
Length = 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 541 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRT 687
+K + VCYKC T H + C + +S F KCF C T
Sbjct: 157 TKKTSAGVGVCYKCRATSHITKHCKV--TTTTESPF--PFAKCFICGET 201
>SB_6211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 532 QEFSKPIAMSSSVCYKCNRTGHFARE--CTQGGVVSRDSGFNRQREKCFKCNR 684
++ ++ ++ C+ CNRTGH AR+ C G C K R
Sbjct: 209 KKINRKSGLNQGRCFNCNRTGHIARDPVCPAKSQNCNSCGIKSHFSACCKITR 261
>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1957
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 535 EFSKPIAMSSSVCYKCNRTGHFARE--CTQGGVVSRDSGFNRQREKCFKCNR 684
+ ++ ++ C+ CNRTGH AR+ C G C K R
Sbjct: 920 KINRQSGLNQGRCFNCNRTGHIARDPVCPAKSQSCNSCGIKGHFSACCKTTR 971
>SB_27219| Best HMM Match : Cad (HMM E-Value=4)
Length = 297
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 225 NVHCNVSVYRIVNVFRIHIKFKCYKWNVVF*YLFFYILI--MVVNLCCIY 368
NV+ +V+VY +NV+ + +FK +++ F +F Y+++ V L C Y
Sbjct: 139 NVYYSVTVYYSINVY--YSRFKSNPYDLNFGLIFVYVVLYGYVTELTCSY 186
>SB_52753| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06)
Length = 357
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 8/44 (18%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECT--------QGGVVSRDSGFNRQREK 666
S CY C R GH +R CT + R+SG RQ K
Sbjct: 301 SDLTCYTCGRVGHISRFCTSQQDQAIPRNQTTGRNSGRKRQERK 344
>SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074)
Length = 996
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFK 675
C+KC + H+AR C GG ++D + ++++ +K
Sbjct: 64 CHKCGKRNHYARMC-WGGAKTKDETTSERQDQRWK 97
>SB_33889| Best HMM Match : zf-CCHC (HMM E-Value=2.1e-05)
Length = 525
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFK 675
CY C++ GH R+C + + S S + +RE K
Sbjct: 256 CYHCHKFGHIKRDCRE--LASGSSDYAHKRENAHK 288
>SB_55324| Best HMM Match : zf-CCHC (HMM E-Value=0.00014)
Length = 344
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECT 615
S+ CY C HFAREC+
Sbjct: 296 SNSCYDCGEERHFARECS 313
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFARE--CTQGGVVSRDSGFNRQREKCFKCNR 684
KP ++ C+ CNRTGH AR C G C K R
Sbjct: 1219 KP-GLNQGRCFNCNRTGHIARNPVCPAKSQNCNSCGIKGHFSACCKTTR 1266
>SB_21549| Best HMM Match : SNF (HMM E-Value=2.3e-18)
Length = 515
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 330 YILIMVVNLCCIYFIHTLCW 389
Y + M+ LCCIY+I L W
Sbjct: 368 YAICMISYLCCIYYIVILAW 387
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREK 666
C+KC + H+AR C G ++ RQ ++
Sbjct: 238 CHKCGKRNHYARMCRSGANTKDETISERQDQR 269
>SB_35115| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06)
Length = 196
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 559 SSSVCYKCNRTGHFARECT 615
S CY C R GH +R CT
Sbjct: 140 SDLTCYTCGRVGHISRFCT 158
>SB_20451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1328
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 568 VCYKCNRTGHFARECTQGGVVSRD 639
+CYKC + GH A C + RD
Sbjct: 365 LCYKCFKGGHIAPRCRRDSACQRD 388
>SB_13654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1451
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCN 681
C KC + GHFAR C +R S N+ + K N
Sbjct: 187 CRKCKKVGHFARVCRS----TRKSSVNQVEKAASKYN 219
>SB_59531| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 323
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 26 AICNKCQKKGHFAKVC-KGKAVPKE 49
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
Length = 615
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 136 AICNKCQKKGHFAKVC-KGKAVPKE 159
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 139 AICNKCQKKGHFAKVC-KGKAVPKE 162
>SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36)
Length = 650
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 571 CYKCNRTGHFARECT 615
C+ CNR GH A CT
Sbjct: 11 CFACNRLGHLANGCT 25
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 579
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 195 AICNKCQKKGHFAKVC-KGKAVPKE 218
>SB_25683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 249
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 74 AICNKCQKKGHFAKVC-KGKAVPKE 97
>SB_25586| Best HMM Match : RVT_1 (HMM E-Value=2.3e-18)
Length = 802
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 123 AICNKCQKKGHFAKVC-KGKAVPKE 146
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 568 VCYKCNRTGHFAREC 612
+CY+C+ HFAR+C
Sbjct: 2 LCYRCHDPSHFARDC 16
>SB_12829| Best HMM Match : zf-CCHC (HMM E-Value=6e-06)
Length = 159
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 499 VERCYISVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQ 618
V +CY + + S S C+ C + GH R C Q
Sbjct: 116 VSKCYRC--DGKHDPRSCVFSQSKCFSCGKIGHIKRACRQ 153
>SB_6083| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 176
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 74 AICNKCQKKGHFAKVC-KGKAVPKE 97
>SB_5734| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 508
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 26 AICNKCQKKGHFAKVC-KGKAVPKE 49
>SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24)
Length = 627
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 63 AICNKCQKKGHFAKVC-KGKAVPKE 86
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 415 AICNKCQKKGHFAKVC-KGKAVPKE 438
>SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 538
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 352 AICNKCQKKGHFAKVC-KGKAVPKE 375
>SB_25715| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 270
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 26 AICNKCQKKGHFAKVC-KGKAVPKE 49
>SB_24493| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 176
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 74 AICNKCQKKGHFAKVC-KGKAVPKE 97
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_23207| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 260
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 74 AICNKCQKKGHFAKVC-KGKAVPKE 97
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 231 AICNKCQKKGHFAKVC-KGKAVPKE 254
>SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 434
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 216 AICNKCQKKGHFAKVC-KGKAVPKE 239
>SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 462
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 351 AICNKCQKKGHFAKVC-KGKAVPKE 374
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 515 AICNKCQKKGHFAKVC-KGKAVPKE 538
>SB_2338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1
Query: 499 VERCYISVLSAQEFSKPIAMSSSVCYKCNRTGHFARECTQ 618
V +CY + + S S C+ C + GH R C Q
Sbjct: 1246 VSKCYRC--DGKHDPRSCVFSQSKCFSCGKIGHIKRACRQ 1283
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 565 SVCYKCNRTGHFARECTQGGVVSRD 639
++C KC + GHFA+ C +G V ++
Sbjct: 576 AICNKCQKKGHFAKVC-KGKAVPKE 599
>SB_58669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3038
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 523 LSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
L+++E +K + +S+ +C+KC GHF C
Sbjct: 487 LNSEERNK-LVLSNRLCFKCLSGGHFRDTC 515
>SB_46097| Best HMM Match : zf-CCHC (HMM E-Value=7.2e-05)
Length = 430
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
C KC + GHFAR C
Sbjct: 126 CRKCKKVGHFARVC 139
>SB_34988| Best HMM Match : zf-CCHC (HMM E-Value=3e-12)
Length = 469
Score = 27.9 bits (59), Expect = 8.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQ 618
CY C + GH+ EC+Q
Sbjct: 176 CYNCAKEGHYGYECSQ 191
>SB_31294| Best HMM Match : 7tm_1 (HMM E-Value=7.2)
Length = 231
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 270 RIHIKFKCYKWNVVF*YLFFYILIMVVNLCCIYFIHTLCWCEIKCLMDY 416
R++ + C ++F + + + V+L C Y +TL +C K L +
Sbjct: 85 RLNRRVLCQSLVIIFVHYLCWFPYLFVHLTCFYTNYTLAYCGNKILTSF 133
>SB_14676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
C KC + GHFAR C
Sbjct: 236 CRKCKKVGHFARVC 249
>SB_58000| Best HMM Match : MATH (HMM E-Value=1.1e-19)
Length = 1451
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 571 CYKCNRTGHFAREC 612
C KC + GHFAR C
Sbjct: 236 CRKCKKVGHFARVC 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,967,340
Number of Sequences: 59808
Number of extensions: 366698
Number of successful extensions: 1309
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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