Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0948
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 46 4e-05
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 46 4e-05
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 46 4e-05
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 33 0.28
U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger pr... 33 0.48
BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p pro... 33 0.48
BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p pro... 33 0.48
AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA ... 33 0.48
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 31 1.1
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 31 1.1
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 31 1.1
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 31 1.1
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 31 1.1
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 31 1.1
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 31 1.1
AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p pro... 30 2.6
AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein... 30 2.6
AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family sp... 30 2.6
AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-P... 30 2.6
AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein ... 30 3.4
AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA... 30 3.4
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 18/59 (30%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECT-----------------QGGVVSRD-SGFNRQREKCFKCNR 684
S+ CYKCNR GHFAR+C+ GG+ D G R REKC+KCN+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQ 62
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 502 ERCYISVLSAQEFSKPIAMSSS-VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 678
ERCY SK + + CY+CN+TGH+ R C + V+ N C+KC
Sbjct: 75 ERCY-RCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPE--AVNERGPTN---VSCYKC 128
Query: 679 NRT 687
NRT
Sbjct: 129 NRT 131
Score = 35.9 bits (79), Expect = 0.052
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQG----------GVVSRDSGFNRQREKCFKCNRT 687
CYKCN+ GHFAR C + G +S+D C++CN+T
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-TQADNPTCYRCNKT 104
Score = 33.5 bits (73), Expect = 0.28
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQ 618
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 541 SKPIAMSSSVCYKCNRTGHFARECTQGG 624
SK +S CY C ++GH REC + G
Sbjct: 135 SKNCPETSKTCYGCGKSGHLRRECDEKG 162
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 18/59 (30%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECT-----------------QGGVVSRD-SGFNRQREKCFKCNR 684
S+ CYKCNR GHFAR+C+ GG+ D G R REKC+KCN+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQ 62
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 502 ERCYISVLSAQEFSKPIAMSSS-VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 678
ERCY SK + + CY+CN+TGH+ R C + V+ N C+KC
Sbjct: 75 ERCY-RCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPE--AVNERGPTN---VSCYKC 128
Query: 679 NRT 687
NRT
Sbjct: 129 NRT 131
Score = 35.9 bits (79), Expect = 0.052
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQG----------GVVSRDSGFNRQREKCFKCNRT 687
CYKCN+ GHFAR C + G +S+D C++CN+T
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-TQADNPTCYRCNKT 104
Score = 33.5 bits (73), Expect = 0.28
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQ 618
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 541 SKPIAMSSSVCYKCNRTGHFARECTQGG 624
SK +S CY C ++GH REC + G
Sbjct: 135 SKNCPETSKTCYGCGKSGHLRRECDEKG 162
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 46.4 bits (105), Expect = 4e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 18/59 (30%)
Frame = +1
Query: 562 SSVCYKCNRTGHFARECT-----------------QGGVVSRD-SGFNRQREKCFKCNR 684
S+ CYKCNR GHFAR+C+ GG+ D G R REKC+KCN+
Sbjct: 4 SATCYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQ 62
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 502 ERCYISVLSAQEFSKPIAMSSS-VCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKC 678
ERCY SK + + CY+CN+TGH+ R C + V+ N C+KC
Sbjct: 75 ERCY-RCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPE--AVNERGPTN---VSCYKC 128
Query: 679 NRT 687
NRT
Sbjct: 129 NRT 131
Score = 35.9 bits (79), Expect = 0.052
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 10/49 (20%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQG----------GVVSRDSGFNRQREKCFKCNRT 687
CYKCN+ GHFAR C + G +S+D C++CN+T
Sbjct: 57 CYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-TQADNPTCYRCNKT 104
Score = 33.5 bits (73), Expect = 0.28
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQ 618
CYKCNRTGH ++ C +
Sbjct: 125 CYKCNRTGHISKNCPE 140
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 541 SKPIAMSSSVCYKCNRTGHFARECTQGG 624
SK +S CY C ++GH REC + G
Sbjct: 135 SKNCPETSKTCYGCGKSGHLRRECDEKG 162
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 33.5 bits (73), Expect = 0.28
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 541 SKPIAMSSSV-CYKCNRTGHFARECTQGGVVSR 636
+KP S+V CY+C + GHF+ +C + G ++
Sbjct: 234 AKPQREKSNVTCYRCGQPGHFSNQCPKNGTAAK 266
>U26549-1|AAA67954.1| 296|Drosophila melanogaster zinc finger
protein protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.48
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFARECTQG 621
P + CYKC GH+A +C +G
Sbjct: 260 PTPLEEITCYKCGNKGHYANKCPKG 284
>BT029412-1|ABK57069.1| 320|Drosophila melanogaster IP02511p
protein.
Length = 320
Score = 32.7 bits (71), Expect = 0.48
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFARECTQG 621
P + CYKC GH+A +C +G
Sbjct: 284 PTPLEEITCYKCGNKGHYANKCPKG 308
>BT025009-1|ABE01239.1| 296|Drosophila melanogaster IP02509p
protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.48
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFARECTQG 621
P + CYKC GH+A +C +G
Sbjct: 260 PTPLEEITCYKCGNKGHYANKCPKG 284
>AE014134-157|AAF51453.1| 296|Drosophila melanogaster CG3642-PA
protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.48
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 547 PIAMSSSVCYKCNRTGHFARECTQG 621
P + CYKC GH+A +C +G
Sbjct: 260 PTPLEEITCYKCGNKGHYANKCPKG 284
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 514 ISVLSAQEFSKPIAMSSSVCYKCNRTGHFAREC 612
+ V +++ KP CY+C R+GH+++EC
Sbjct: 151 VQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
>AY095057-1|AAM11385.1| 258|Drosophila melanogaster LD46359p
protein.
Length = 258
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVS--RDSGFNRQR 660
CY+C GHFAR C + R + F+R R
Sbjct: 117 CYECGGRGHFARHCRERKARQRRRSNSFSRSR 148
>AJ249466-1|CAB60724.1| 258|Drosophila melanogaster DXl6 protein
protein.
Length = 258
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVS--RDSGFNRQR 660
CY+C GHFAR C + R + F+R R
Sbjct: 117 CYECGGRGHFARHCRERKARQRRRSNSFSRSR 148
>AF232774-1|AAF43414.1| 258|Drosophila melanogaster SR family
splicing factor 9G8 protein.
Length = 258
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVS--RDSGFNRQR 660
CY+C GHFAR C + R + F+R R
Sbjct: 117 CYECGGRGHFARHCRERKARQRRRSNSFSRSR 148
>AE014134-1188|AAF52454.1| 258|Drosophila melanogaster CG10203-PA
protein.
Length = 258
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 571 CYKCNRTGHFARECTQGGVVS--RDSGFNRQR 660
CY+C GHFAR C + R + F+R R
Sbjct: 117 CYECGGRGHFARHCRERKARQRRRSNSFSRSR 148
>AJ243904-1|CAB64937.1| 773|Drosophila melanogaster SF1 protein
protein.
Length = 773
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFAREC 612
KPI ++ VC C TGH ++C
Sbjct: 532 KPIITNTIVCTSCGGTGHLTKDC 554
>AE014297-2366|AAF55430.3| 787|Drosophila melanogaster CG5836-PA
protein.
Length = 787
Score = 29.9 bits (64), Expect = 3.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 544 KPIAMSSSVCYKCNRTGHFAREC 612
KPI ++ VC C TGH ++C
Sbjct: 532 KPIITNTIVCTSCGGTGHLTKDC 554
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,349,259
Number of Sequences: 53049
Number of extensions: 523226
Number of successful extensions: 1061
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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