Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0945
(673 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29000.1 68415.m03527 leucine-rich repeat family protein / pr... 32 0.40
At1g07560.1 68414.m00809 leucine-rich repeat protein kinase, put... 31 0.70
At4g29460.1 68417.m04205 phospholipase A2 gamma, secretory low m... 31 0.92
At5g65580.1 68418.m08251 expressed protein 30 1.2
At2g19690.1 68415.m02301 phospholipase A2 beta, secretory low mo... 30 1.2
At2g28970.1 68415.m03524 leucine-rich repeat protein kinase, put... 30 1.6
At1g40125.1 68414.m04763 hypothetical protein member of hypothet... 30 1.6
At1g18420.1 68414.m02300 expressed protein contains Pfam profile... 30 1.6
At5g14710.1 68418.m01725 expressed protein 29 2.1
At4g38890.1 68417.m05508 dihydrouridine synthase family protein ... 28 4.9
At4g29990.1 68417.m04266 light repressible receptor protein kina... 28 4.9
At1g13310.1 68414.m01545 expressed protein 28 6.5
At5g59680.1 68418.m07482 leucine-rich repeat protein kinase, put... 27 8.6
At5g59650.1 68418.m07479 leucine-rich repeat protein kinase, put... 27 8.6
At4g29470.1 68417.m04206 phospholipase A2, putative similar to s... 27 8.6
At3g46400.1 68416.m05030 leucine-rich repeat protein kinase, put... 27 8.6
At3g46330.1 68416.m05017 leucine-rich repeat protein kinase, put... 27 8.6
>At2g29000.1 68415.m03527 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 872
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRII-SMQMGGDLQQYTRG 520
H+ N LV +CNEEDHL ++ GDL+Q+ G
Sbjct: 617 HHTNLVNLVGYCNEEDHLALVYEYAANGDLKQHLSG 652
>At1g07560.1 68414.m00809 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 856
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 413 IYHNENKTFLVWCNEEDHLRIISMQM-GGDLQQYTRG 520
+YH + + +C+E+DHL +I M GDL+++ G
Sbjct: 606 VYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSG 642
>At4g29460.1 68417.m04205 phospholipase A2 gamma, secretory low
molecular weight identical to secretory low molecular
weight phospholipase A2 gamma [Arabidopsis thaliana]
GI:26006457; contains INTERPRO domain IPR001211
phospholipase A2
Length = 187
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 478 LDADGWRPAAVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNL 609
+D G +K+ VN++ K I S+ +++GF T CP ++
Sbjct: 76 VDLKGMTYVNCHKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSI 119
>At5g65580.1 68418.m08251 expressed protein
Length = 102
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 221 QGDGGQGLRHPASLEGELKGTFYPLTGMSKE 313
Q DGG G R L GE+KG +PLT M +E
Sbjct: 68 QTDGGDGERE-RRLRGEVKGFSFPLTTMVEE 97
>At2g19690.1 68415.m02301 phospholipase A2 beta, secretory low
molecular weight identical to secretory low molecular
weight phospholipase A2 beta [Arabidopsis thaliana]
GI:25992715; contains INTERPRO domain IPR001211
phospholipase A2
Length = 147
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 472 HHLDADGWRPAAVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCP 600
H ++ +G + +K+ VN + K I S + ++GF T CP
Sbjct: 76 HCVELNGMTNISCHKKFQRCVNRLSKAIKQSKNKKVGFSTKCP 118
>At2g28970.1 68415.m03524 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 786
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRIISMQM-GGDLQQYTRG 520
H++N LV +C+E DHL +I M GDL+Q+ G
Sbjct: 531 HHKNLVSLVGYCDEGDHLALIYEYMPNGDLKQHLSG 566
>At1g40125.1 68414.m04763 hypothetical protein member of
hypothetical protein common family
Length = 168
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 534 QRDREEDPVLAPRPARLPHVLPDQPGHTVRASVHIKLPKLAAD 662
Q ++DP L+P P H P G+ + + LP+L D
Sbjct: 95 QETAQQDPPLSPDPKTASHSHPSSQGNNFQEGIPAVLPELQED 137
>At1g18420.1 68414.m02300 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 581
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 54 HNGFKKTDKHPPKNWGDVDTLGNLDPA 134
H + PPKNW DV T NL A
Sbjct: 470 HKSQSEATLRPPKNWDDVTTAANLSSA 496
>At5g14710.1 68418.m01725 expressed protein
Length = 124
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 428 NKTFLVWCNEEDHLRIISMQMG 493
NKT +V C+ EDH+ II+ Q+G
Sbjct: 22 NKTEIVICSYEDHILIIATQIG 43
>At4g38890.1 68417.m05508 dihydrouridine synthase family protein
contains Pfam domain, PF01207: Dihydrouridine synthase
(Dus)
Length = 700
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 84 PPKNWG--DVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQYKEMED 236
PP +G D++TL + AG++V + + G+ EG+ F P + Y E+
Sbjct: 647 PPSYFGRDDLETLMMSESAGDWVRISEMLLGKVPEGFTFAPKHKSNAYDRAEN 699
>At4g29990.1 68417.m04266 light repressible receptor protein kinase
identical to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 876
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRIISMQM-GGDLQQYTRG 520
H+ N T L+ +CNE++H+ +I M G+L Y G
Sbjct: 625 HHTNLTSLIGYCNEDNHMALIYEYMANGNLGDYLSG 660
>At1g13310.1 68414.m01545 expressed protein
Length = 111
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 402 VGQKRQALAACRKRSPSLNRKW 337
VG R+ALAA +K +PS + KW
Sbjct: 27 VGVLRRALAAAKKSTPSKDDKW 48
>At5g59680.1 68418.m07482 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 882
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRII-SMQMGGDLQQYTRG 520
H+ N LV +C+E DHL +I GDL+Q+ G
Sbjct: 632 HHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSG 667
>At5g59650.1 68418.m07479 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 892
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRII-SMQMGGDLQQYTRG 520
H+ N LV +C+E DHL +I GDL+Q+ G
Sbjct: 639 HHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSG 674
>At4g29470.1 68417.m04206 phospholipase A2, putative similar to
secretory low molecular weight phospholipase A2 gamma
[Arabidopsis thaliana] GI:26006457; contains INTERPRO
domain IPR001211 phospholipase A2
Length = 191
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 478 LDADGWRPAAVYKRLVSAVNEIEKKIPFSHHDRLGFLTFCP 600
+D G +K+ VNE+++ I S++ ++GF CP
Sbjct: 76 VDLKGMTYVDCHKQFQRCVNELKQSIQESNNQKVGFSKECP 116
>At3g46400.1 68416.m05030 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 883
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRIISMQM-GGDLQQYTRG 520
H+ N LV +C+E+DHL +I M GDL+ + G
Sbjct: 628 HHINLVSLVGYCDEKDHLALIYEYMPNGDLKDHLSG 663
>At3g46330.1 68416.m05017 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 878
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 HNENKTFLV-WCNEEDHLRIISMQM-GGDLQQYTRG 520
H+ N LV +C+E+DH +I M GDL Q+ G
Sbjct: 618 HHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSG 653
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,494,208
Number of Sequences: 28952
Number of extensions: 229678
Number of successful extensions: 851
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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