Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0941
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    26   0.24 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    26   0.24 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.9  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 9/41 (21%), Positives = 24/41 (58%)
 Frame = +3

Query: 396 FNIYQAIMYIDILFSIL*SLVDTLDCNLFYFDINKVLSVIK 518
           F +Y +++ +D +  ++  ++  L C     ++ K+L+V+K
Sbjct: 285 FTLYSSLLLLDYVSCVVALIILILQCGRVRSEVVKILNVLK 325


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 9/41 (21%), Positives = 24/41 (58%)
 Frame = +3

Query: 396 FNIYQAIMYIDILFSIL*SLVDTLDCNLFYFDINKVLSVIK 518
           F +Y +++ +D +  ++  ++  L C     ++ K+L+V+K
Sbjct: 211 FTLYSSLLLLDYVSCVVALIILILQCGRVRSEVVKILNVLK 251


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 79  HGTFLKAMFKQVTFLAEALLLEWSH 5
           HG       KQ  F+A   L +W+H
Sbjct: 196 HGKIKTFKCKQCDFVAITKLEQWNH 220


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 276 YCICSYILKWKVFT 235
           YCIC YI    +F+
Sbjct: 47  YCICGYIFSAILFS 60



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 24  SASARKVTCLNIAFKNVPCRYLY 92
           S+   + TCLN++     C Y++
Sbjct: 32  SSQKGQKTCLNLSINYCICGYIF 54


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 293 YYRIKYIVSVHTYLNGKYSQI 231
           YY I Y   +  YLN   + I
Sbjct: 329 YYNILYFCRIMVYLNSAINPI 349


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 190 FVVCNFDLSVFSLFIC 237
           FVV +F ++ FS +IC
Sbjct: 36  FVVFSFAVTFFSAWIC 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,768
Number of Sequences: 336
Number of extensions: 2145
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)