BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0941 (529 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1328 + 29361248-29361502,29361903-29362453,29362585-293626... 28 5.3 >06_03_1328 + 29361248-29361502,29361903-29362453,29362585-29362671, 29362910-29362966,29363069-29363307,29364190-29364308, 29364397-29364483,29365511-29365567 Length = 483 Score = 27.9 bits (59), Expect = 5.3 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -3 Query: 374 LKLKRLNLYFRL*LSFCLPDTRVFCIFYYRIKYIVSVHTYL 252 LKLK +N+Y RL +P T + C+ Y+ + +V + +L Sbjct: 249 LKLKDVNMYLRL----AIPSTFMTCLEYWAFEMVVLLAGFL 285 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,353,840 Number of Sequences: 37544 Number of extensions: 170024 Number of successful extensions: 263 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 263 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1166441080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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