Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0941
         (529 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z81489-11|CAJ30223.1|  323|Caenorhabditis elegans Hypothetical p...    27   6.3  

>Z81595-8|CAB54305.1|  345|Caenorhabditis elegans Hypothetical
           protein T22H2.6b protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 317 DTRVF-CIFYYRIKYIVSVHTYL 252
           D R+F CI Y+ IKY  S HT++
Sbjct: 18  DVRIFFCILYFNIKYF-SFHTFI 39


>Z81595-7|CAB54304.1|  358|Caenorhabditis elegans Hypothetical
           protein T22H2.6a protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 317 DTRVF-CIFYYRIKYIVSVHTYL 252
           D R+F CI Y+ IKY  S HT++
Sbjct: 18  DVRIFFCILYFNIKYF-SFHTFI 39


>Z81489-11|CAJ30223.1|  323|Caenorhabditis elegans Hypothetical
           protein C55A1.14 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 11/43 (25%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +2

Query: 218 FSVYLFVNTFHLSMY--EQIQYTLFYNKKYKKHACQVNRKIII 340
           +++Y+F+ +FHL M+    +++ L++    +K   +V +K+ I
Sbjct: 101 YTLYIFIQSFHLLMFLLAFLKFVLYFLPASEKVLVKVQKKVSI 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,250,505
Number of Sequences: 27780
Number of extensions: 192536
Number of successful extensions: 409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)