Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0939
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 43 3e-05
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 39 6e-04
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 36 0.007
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 35 0.012
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 31 0.15
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 29 0.60
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.60
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 27 2.4
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 27 2.4
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 26 4.2
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.2
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 26 4.2
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 26 5.6
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 26 5.6
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 25 7.4
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 25 9.8
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 25 9.8
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +1
Query: 508 FTRCIALELAPHGIRANTVSPGPVETDIFETAGIPEALQNYAGQLPLKKVGQ 663
FTR ++ + A HGIR N V+PGP+ T + + P+ + Q+PL ++GQ
Sbjct: 202 FTRGLSNQYAQHGIRVNAVAPGPIYTPLVSST-FPKEKIELSDQVPLGRMGQ 252
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 72 RTTAIMFAKEGADVIIVGRNEEK 140
+ A+MFA+EG+D++I EE+
Sbjct: 56 KAAAVMFAREGSDLVISCLPEER 78
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRGNII 427
GKLD +I NAG+L+ ++ I + ++ + N + V AIPHL KT+G I+
Sbjct: 77 GKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKTKGTIV 133
Score = 25.0 bits (52), Expect = 9.8
Identities = 8/15 (53%), Positives = 14/15 (93%)
Frame = +1
Query: 28 SSKIVLITGASRGIG 72
+ K++L+TG+S+GIG
Sbjct: 5 AEKVILLTGSSKGIG 19
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 254 IGKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIK 409
+G +D+LINNAG+ + + E++D ++ LR + L IPH+ K
Sbjct: 71 LGPIDVLINNAGLADDTPFEQLSH-ESWDHDVSLVLRGNYLTQRYVIPHMAK 121
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPV 579
T+ +A+ P GIR N +PG +
Sbjct: 156 TKALAVRYGPLGIRVNVCAPGTI 178
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 19 MSFSSKIVLITGASRGIG 72
M+ ++VLITGA+ GIG
Sbjct: 1 MTVEGRVVLITGAAGGIG 18
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 34.7 bits (76), Expect = 0.012
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 502 QPFTRCIALELAPHGIRANTVSPGPVETDIFET 600
+ FT+ +A E+A GIR N +SPG V+T + +
Sbjct: 159 ESFTKVLAAEVASKGIRVNAISPGYVDTPMLSS 191
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 31.1 bits (67), Expect = 0.15
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 78 TAIMFAKEGADVIIVGRNEEKLKEV 152
TA+ A++GA V + GRNEEK ++V
Sbjct: 58 TALELARKGAKVYLAGRNEEKYQKV 82
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 260 KLDILINNAGILKEN-DIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKT 412
KL IL+NNAGI+ ++ +G ++ + TN + L T + +P L +T
Sbjct: 121 KLHILVNNAGIMNPPFELTKDG----YELQIQTNYLSHYLFTELLLPTLRRT 168
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 29.1 bits (62), Expect = 0.60
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 514 RCIALELAPHGIRANTVSPGPVETDI 591
R +A+E AP R N+VSPG ++TD+
Sbjct: 175 RALAVEWAPFA-RVNSVSPGYIDTDL 199
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKT-RGNII 427
G+LD++I NAGI + + + + +V+ NL + A H K +G++I
Sbjct: 87 GRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLI 144
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 29.1 bits (62), Expect = 0.60
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 263 LDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIP-HLIKTRGNII 427
+D+LINNAG+ D + I+ ++ TN+ + +T +P K +G+I+
Sbjct: 86 IDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDIL 141
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIP 397
G++D+L+NNAG + ++S E + NTN+ ++ + P
Sbjct: 41 GRIDVLLNNAGYSVYSPLEST-TEEQIHNIFNTNVFGALEVIKAITP 86
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIP 397
G++D+L+NNAG + ++S E + NTN+ ++ + P
Sbjct: 41 GRIDVLLNNAGYSVYSPLEST-TEEQIHNIFNTNVFGALEVIKAITP 86
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +1
Query: 508 FTRCIALELAPHGIRANTVSPGPVETDI 591
++ + +ELAP G++ ++ G V+T I
Sbjct: 158 YSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 331 DFRRSDEHKPKSFCIDNQRGHTTPDQN 411
D R K KSF ++N GH D++
Sbjct: 769 DLHRKPRRKHKSFTLENYFGHNAEDES 795
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 141 LKEVEVECSK-FGKKPLVITADLAKDEQVKGIVNKTIDASE 260
+ V V+C+ G +PL A L KD +VN + ASE
Sbjct: 192 VSRVVVDCANGVGSQPLKTVAGLVKDSLSIELVNTDVRASE 232
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 25.8 bits (54), Expect = 5.6
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = -2
Query: 448 CSDTR-NINDIASCFDQVWYGHVGYQYRSS*VCVHHFVESLYEAF*LNVIFL*YAS-IVN 275
C++T N +S D +Y S V + H + S + +F L+ IF+ ++ +VN
Sbjct: 56 CTETSFGYNASSSLIDDFYYKGDKRLVLSK-VLITHII-SAFLSF-LSAIFVFFSIFLVN 112
Query: 274 *YIQFSDASIVLLTIPLTCSSFAKSAVITRGFLPN 170
+ + +V +T LTC +FA V+ FLP+
Sbjct: 113 QAVNIINIIVVFITTLLTCLAFAIELVL---FLPH 144
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 99 EGADVIIVGRNEEKLKEVEVECSKFGK 179
+G V+++ E +++ EC+KFGK
Sbjct: 194 DGPIVLVLAPTRELAVQIQQECTKFGK 220
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +2
Query: 293 LKENDIKSEGFIETFD 340
L+E+++K EG+IET++
Sbjct: 633 LEEDELKDEGYIETYE 648
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 9.8
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +3
Query: 42 FDYRSQ*RNRRTTAIMFAKEGADVIIVGRNEEKLKEVEVECSKFGKKPLVITADLAKDEQ 221
FD + R+T ++ KEGA I + E +K +VE ++ + + E+
Sbjct: 450 FDIETALPARKTVEVIAPKEGAAFIPIYEAERSVKVTKVEPEPIDEEEAFSDDEEEEPEE 509
Query: 222 VK 227
+K
Sbjct: 510 IK 511
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +1
Query: 547 IRANTVSPGPVETDIFETAGIPEALQN 627
+R+N +S P++TD ++T+ I ++L+N
Sbjct: 279 LRSNYISAKPLDTDRYDTSSI-QSLKN 304
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,366,647
Number of Sequences: 5004
Number of extensions: 42006
Number of successful extensions: 154
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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