Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0939
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 45 5e-05
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 40 0.001
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 39 0.003
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 38 0.007
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 36 0.030
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 35 0.052
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.090
SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 32 0.37
SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 31 1.1
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 30 1.5
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 30 1.5
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 30 1.5
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08) 29 2.6
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 29 3.4
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017) 29 3.4
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 29 3.4
SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_10111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 28 5.9
SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 248 RCIGKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTR-GNI 424
+ G++D+++NNAGIL++ I ++ +D V +L+ S L+T A PH+ K + G I
Sbjct: 89 KAFGRIDVVVNNAGILRDKSILRMSELD-WDLVQRVHLKGSFLVTRAAWPHMKKQKFGRI 147
Query: 425 I 427
I
Sbjct: 148 I 148
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 520 IALELAPHGIRANTVSPGPVETDIFETAGIPEALQNYAGQLPLKKVG 660
+A E+A GIR N V PG +ET+I + G PE + + +P+ + G
Sbjct: 176 LAKEVAADGIRVNAVRPGVIETEIHASGGEPERVARVSQSVPMGRGG 222
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRG 418
G+LD+L+NNAGIL+ + + + V TN+ S L AI + +G
Sbjct: 84 GRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQG 137
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 16 EMSFSSKIVLITGASRGIGA 75
E + K++LITGASRGIGA
Sbjct: 2 EETLMEKVMLITGASRGIGA 21
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +2
Query: 248 RCIGKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRGNII 427
+ G D ++NNAG + +N E E FD+V++ NL+ S + +P +IK +I
Sbjct: 75 KSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRSFLPKMIKAGKGVI 134
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRGNII 427
G+LD+L+NNA + S ET++++M NL ++ A PHL ++ G+II
Sbjct: 92 GQLDLLVNNASQFCPTESGSVQ-EETWNKLMGVNLSFPFFLSQAAFPHLKRSHGSII 147
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 257 GKLDILINNAGI-LKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHL 403
G+LDIL NNAGI ++END+ G +T +++ N++ +L T + + H+
Sbjct: 83 GRLDILCNNAGIAVRENDLLRSGAWKT---IIDINVKGVILGTLLGLDHM 129
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 KLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTR-GNII 427
K+DILINN+G + IE +++ N A V +T +PH+I+ + G+I+
Sbjct: 129 KIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKAVLPHMIERKNGHIV 185
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 34.3 bits (75), Expect = 0.090
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTR-GNII 427
G++D+L+NNAGI + + ++V N+ + +TN IPH+ K R G+++
Sbjct: 114 GRIDVLVNNAGI-GLFCVPECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQRAGHVV 170
>SB_58583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPVETDIFETAGIPEAL-QNYAGQLPLKKVG 660
T+ +A E A GIR N V+PG ++T EA+ Q ++P+K++G
Sbjct: 50 TKALADECADIGIRVNCVAPGVIKTRFSAALWKNEAMHQKVKERIPMKRLG 100
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPVETDIFE--TAGIPEALQNYAGQLPLKKVGQ 663
T+ A+ELA GIR N + PG ++T + A I E ++++ +PL + GQ
Sbjct: 432 TKVCAIELARFGIRCNAILPGFIDTPMTRKVPAHITEQIKHF---IPLGRFGQ 481
>SB_48101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 31.9 bits (69), Expect = 0.48
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 520 IALELAPHGIRANTVSPGPVE 582
+A+E P G+R N V+PGP+E
Sbjct: 7 LAVEWGPQGVRVNCVAPGPIE 27
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTRGNI 424
G LDIL+NNAGILK+ + + ++ + TN + + N P L+K + ++
Sbjct: 99 GGLDILVNNAGILKK-ESSGTSYARKAEDCVKTNFFGMLDVYNSMYP-LLKEQASM 152
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPVET 585
T+ +A E +G+R N ++PGP+ET
Sbjct: 2 TKSLAAEWGRYGMRFNAIAPGPIET 26
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 520 IALELAPHGIRANTVSPGPVETDIFETAGIPEALQNYAGQLPLKK 654
+A +LA GIR NT+SPG T +F E+ + +P +
Sbjct: 459 MARDLAKLGIRVNTISPGIFNTPMFMAGRTKESREAITKSVPFPR 503
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPG 573
T+C+AL+LA IR N++SPG
Sbjct: 212 TKCMALDLAKDHIRVNSLSPG 232
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 72 RTTAIMFAKEGADVIIVGRNEEKLKEVEVECSKFGKKPLVITADLAKDEQVKGIV 236
+ T A+EGA V I+ N+E ++VE + G K D+A + +V
Sbjct: 38 KATVERLAREGASVAILDINDELGQQVETDLRSSGNKVKFYHVDVANKDMCAHVV 92
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +1
Query: 508 FTRCIALELAPHGIRANTVSPGPVETD-----IFETAGIPEALQNYAGQLPLKKVGQ 663
FT+ IA + GIR N V PG + T+ I T +AL ++ + P + G+
Sbjct: 167 FTKAIAADYITKGIRVNAVCPGTIYTESLQYRIDSTPDPQKALADFLARQPTGRFGK 223
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 72 RTTAIMFAKEGADVIIVGRNEEKLKEV 152
+ TA+ A+EGA VI N EKLKE+
Sbjct: 30 KATALACAREGAKVIATDINAEKLKEL 56
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIKTR 415
G +LINN+G+ +N E E F++V++ N++ + + +P +I+ +
Sbjct: 83 GAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEAK 135
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 520 IALELAPHGIRANTVSPGPVETDIFETAGIPEALQ 624
IA +LA +GIR NT++PG T + E+ +PE ++
Sbjct: 188 IARDLARNGIRVNTIAPGLFLTPLLES--LPEKVR 220
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPVETD-IFETAGIPEALQNYAGQLPLKKVGQ 663
T +A+E +GIR N V+PG + ++ IP+ + LP K+ G+
Sbjct: 197 TMSLAVEWISNGIRINNVAPGVIFSETAAANYPIPDLFEKIRQTLPAKRCGE 248
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 117 IVGRNEEKLKEVEVECSKFGKKPLVITADLAKD 215
I+ NEEKLKE E E K KK ++ +D KD
Sbjct: 626 IIKENEEKLKEKEKEIEKL-KKKIIELSDKLKD 657
>SB_24756| Best HMM Match : 7tm_1 (HMM E-Value=2e-08)
Length = 690
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = -3
Query: 510 EWLRAALDTLYVTELTTDVEVAATLETLMILPLVLIRCGMATLVINTEALRFVFITSSKV 331
+++R L TL V E + +A +I+PL LI + V+ +E + V
Sbjct: 356 KYMRKGLSTL-VAERMAFIRMARIAPYCLIIPLSLIGNSLVVAVVASERRMHKTVNFLIV 414
Query: 330 SMKPSDLMSFSFSMPALL 277
+M SDL+ MP ++
Sbjct: 415 NMSVSDLLVTVVYMPRVI 432
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 257 GKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHL 403
G++DIL+NNAGI ++++ E NTN + ++ IP +
Sbjct: 83 GRIDILVNNAGISHIGMLETQ-TQSLVKETFNTNFFGVLRMSKAVIPRM 130
>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
Length = 453
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 22 SFSSKIVLITGASRGIG 72
S S K+ L+TGASRGIG
Sbjct: 49 SLSGKVCLVTGASRGIG 65
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/52 (23%), Positives = 29/52 (55%)
Frame = +2
Query: 254 IGKLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAIPHLIK 409
+G++D+L+NNAG + + F E + ++ ++ + L + +A ++K
Sbjct: 114 LGRIDVLVNNAGAMTKAPFLDMAFDE-WRKIFTVDVDGAFLCSQIAARQMVK 164
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 511 TRCIALELAPHGIRANTVSPGPVET 585
T+ +ALEL H I N V+PG + T
Sbjct: 200 TKAMALELVRHKILVNAVAPGAIAT 224
>SB_39007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 502 QPFTRCIALELAPHGIRANTVSPGPVETDIFETAGIPEALQ 624
+ F+ + LEL P G++ V PG T++ + +AL+
Sbjct: 53 EAFSSALRLELEPWGVKVIVVEPGGYRTEMTHKHNLIQALE 93
>SB_10111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 532 LAPHGIRANTVSPGPVETDIFETAGIPEALQNYAG 636
+ P G RA T P + F T G P A +AG
Sbjct: 21 VTPQGTRAMTTKPSRIVIPYFYTYGAPRAAYGHAG 55
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 260 KLDILINNAGILKENDIKSEGFIETFDEVMNTNLRASVLITNVAI 394
+LDIL+NNAG+ + + K+ ++ F+ N L+TN+ +
Sbjct: 147 RLDILVNNAGVYQPANKKT---VDGFETQFGVNHLGHFLLTNMLL 188
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 266 DILINNAGI-LKENDIKSEGFIETFDEVMNTNLRASVLITN-VAIPHLIKTRGNII 427
D+L+NNAG + E+ ++ + E+FD + TN+RA + I VA + K G I
Sbjct: 28 DLLVNNAGFAIFESFLEIKP--ESFDRMHETNVRAPLFIAQAVAKKMVAKGEGGAI 81
>SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 438 LETLMILPLVLIRCGMATLVINTEALRFVFITSSKVS 328
++++ LP I+C AT+ NT+ R T++K S
Sbjct: 135 IQSIRALPWPPIQCSRATMATNTKCSRATMATNTKYS 171
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,379
Number of Sequences: 59808
Number of extensions: 312757
Number of successful extensions: 812
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1717720750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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