Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0932
(441 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 140 1e-34
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 140 1e-34
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 95 6e-21
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 77 1e-15
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 50 2e-07
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 41 7e-05
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.32
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 29 0.42
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 2.2
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 26 2.2
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 2.2
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 2.2
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 3.9
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 3.9
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 25 6.8
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 6.8
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 24 9.0
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 24 9.0
SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr... 24 9.0
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 24 9.0
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 24 9.0
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 24 9.0
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 140 bits (338), Expect = 1e-34
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL 181
FSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICL
Sbjct: 483 FSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICL 542
Query: 182 KDLEEDHACIPIKKSDPVVSYRET 253
KDL+EDHA IP+K S PVVSYRE+
Sbjct: 543 KDLQEDHAGIPLKISPPVVSYRES 566
Score = 70.5 bits (165), Expect = 1e-13
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +1
Query: 256 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRAR*LTEKYEYN 432
+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++ ++
Sbjct: 568 SEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWD 626
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 140 bits (338), Expect = 1e-34
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL 181
FSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V C ESGEHIVAGAGELHLEICL
Sbjct: 483 FSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICL 542
Query: 182 KDLEEDHACIPIKKSDPVVSYRET 253
KDL+EDHA IP+K S PVVSYRE+
Sbjct: 543 KDLQEDHAGIPLKISPPVVSYRES 566
Score = 70.5 bits (165), Expect = 1e-13
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = +1
Query: 256 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRAR*LTEKYEYN 432
+E S LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++ ++
Sbjct: 568 SEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWD 626
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 94.7 bits (225), Expect = 6e-21
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +2
Query: 8 VSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKD 187
+ P+VRVA+EP P ++ KLV GL L ++DP VQ EE+GEH++ AGE+HLE CLKD
Sbjct: 560 MEPIVRVALEPVRPFEMNKLVTGLDMLNQADPCVQIAVEENGEHVIMCAGEIHLERCLKD 619
Query: 188 LEEDHACIPIKKSDPVVSYRETEL 259
L E A I I+ S P+V YRET +
Sbjct: 620 LRERFAKIEIQASQPLVPYRETTI 643
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 77.0 bits (181), Expect = 1e-15
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = +2
Query: 17 VVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEE 196
V +VAVEP NP++LPKL++GL++ KS P+ EESGEH + G GE++++ L DL
Sbjct: 600 VFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRT 659
Query: 197 DHACIPIKKSDPVVSYRETELRNRTSSV 280
++ I I+ SDPV + ET + TSS+
Sbjct: 660 LYSEIEIRVSDPVARFCETAV--DTSSI 685
Score = 40.3 bits (90), Expect = 1e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 277 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVN 375
C S +PNK NR+ M +P+ G+ DI+ G+VN
Sbjct: 687 CFSDTPNKKNRITMVVEPLEKGISNDIENGKVN 719
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 49.6 bits (113), Expect = 2e-07
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEIC 178
F PV+ ++++PK+ D + L R + DP + ++ ES E I++G GELHLE+
Sbjct: 470 FVPEPVISLSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVY 528
Query: 179 LKDLEEDHACIPIKKSDPVVSYRET 253
++ + ++ + + P V++RET
Sbjct: 529 VERMRREYK-VDCETGKPRVAFRET 552
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 41.1 bits (92), Expect = 7e-05
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 14 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEHIVAGAGELHLEICLKDL 190
PV ++EP + D P L+E L + + DP + + E+G+ ++ G G +HL++ + L
Sbjct: 443 PVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQGMGIMHLQVSYERL 502
Query: 191 EEDHACIPIKKSDPVVSYRETELRNRTSSVSQS 289
+ V YRET + +SV+ S
Sbjct: 503 VSEFGA-RASLGKVQVGYRETLIDVSFNSVTLS 534
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.32
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 47 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 175
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 28.7 bits (61), Expect = 0.42
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 243 YDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGS 97
YDTTG+D ++ SS R WS+ P +P ++ I+ T GS
Sbjct: 124 YDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSGS 169
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 343 LPEDIDEGRVNPRDDFKT 396
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 167 LEICLKDLEEDHACIPIKKSDPVVSYRETELRNRTSSVSQSRPTSTTVCS*RLSPC 334
+++ L L + H P+ DP+ Y ELR R + S+ + V S L+ C
Sbjct: 518 IDLLLGRLIDQH---PVILYDPIHEYVNHELRKRENEFSEHKNVKIFVASYNLNGC 570
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 2.2
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 345 QTIRHGLSLHEQTVVLVGRL*E 280
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.2 bits (55), Expect = 2.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 280 LSKSPNKHNRLFMKAQPMPDGL 345
++KS KHN+L K +P+P L
Sbjct: 243 INKSVKKHNKLVKKHKPLPSTL 264
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = -1
Query: 162 SSPAPATMCSPDSSL--IHCTMGSDLARRLRPS 70
S+ +P+T+CSPD+++ ++ G L ++ P+
Sbjct: 403 SNVSPSTICSPDNNVTFVNLAPGEKLTFKIEPN 435
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 280 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRAR*LTEKYEYNS 435
L ++ N+ N+L +P G ED+DEG + ++ L ++ E NS
Sbjct: 644 LVETRNRDNQLLGGLEPSMVGYLEDMDEGEMLDANNLPEMQFALEQELESNS 695
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 24.6 bits (51), Expect = 6.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +2
Query: 104 MVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIK 220
M + IN +S + +E CL L+E H +P++
Sbjct: 1 MKEMINLDSSSEPSIVTKQFSVEECLSKLKEQHCYVPMR 39
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 24.6 bits (51), Expect = 6.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 80 KRLAKSDPMVQCINEESGEHIVAGAGEL 163
KR A + +V C+NE E +A A EL
Sbjct: 83 KRAAIAQQLVNCVNELFYEEALARAAEL 110
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 24.2 bits (50), Expect = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 130 RRTHCRWC 153
RR HCRWC
Sbjct: 45 RRHHCRWC 52
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 24.2 bits (50), Expect = 9.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 234 SCRTVRPS*GIGPALSLKVAQQAQPSVHEGS 326
S + +PS + P ++K AQ AQPS+ + +
Sbjct: 425 STQYYQPSSPVQPVQNVKPAQPAQPSLEDAA 455
>SPCC285.10c |||SPRY domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 382
Score = 24.2 bits (50), Expect = 9.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 275 SWSDSSARSHGTTRQGQTS 219
SW +S S GTT QG T+
Sbjct: 317 SWDAASESSAGTTTQGDTN 335
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 24.2 bits (50), Expect = 9.0
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 326 SPCLMVCQRTLMRVA*IPAMTSRLALGSLQK-STNIT 433
S C +C+R R+ + M+S + S QK S N+T
Sbjct: 110 SSCFKICKRLYNRIQILVFMSSSSLIQSQQKISENVT 146
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 24.2 bits (50), Expect = 9.0
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 41 KNPADLPKLVEGLKRLAKSDPMVQC-INEES--GEHIVAGAGELHLEICLKDLEEDHACI 211
K P +P L KR KS QC I +E + G G+L+ + + + D + +
Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSV 75
Query: 212 P 214
P
Sbjct: 76 P 76
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 24.2 bits (50), Expect = 9.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 259 EESDQLCLSKSPNKHNRLFMKAQP 330
EE + L+KSP+ HNR+ P
Sbjct: 471 EEREIRALAKSPDIHNRIIASMAP 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,827,338
Number of Sequences: 5004
Number of extensions: 36232
Number of successful extensions: 141
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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