Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0932
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 164 3e-41
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 1e-17
SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15) 52 2e-07
SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.97
SB_30434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6) 29 1.3
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 29 1.7
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 1.7
SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17) 29 2.2
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 29 2.2
SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20) 28 3.0
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 28 3.9
SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17) 27 5.2
SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16) 27 5.2
SB_20695| Best HMM Match : YscO (HMM E-Value=4) 27 6.9
SB_5829| Best HMM Match : S4 (HMM E-Value=4.2) 27 6.9
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 27 6.9
SB_36347| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_44311| Best HMM Match : EGF (HMM E-Value=0.048) 27 9.1
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 164 bits (398), Expect = 3e-41
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = +2
Query: 2 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL 181
FSVSPVVRVAVEPKNPADLPKLVEGL RLAKSDPMVQ EESGEHIVAGAGELHLEICL
Sbjct: 473 FSVSPVVRVAVEPKNPADLPKLVEGLNRLAKSDPMVQSFTEESGEHIVAGAGELHLEICL 532
Query: 182 KDLEEDHACIPIKKSDPVVSYRE 250
KDLEEDHACIP+KKS+PVVSYRE
Sbjct: 533 KDLEEDHACIPLKKSEPVVSYRE 555
Score = 81.4 bits (192), Expect = 3e-16
Identities = 36/60 (60%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 AEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEG-RVNPRDDFKTRAR*LTEKYEYN 432
+++S+Q+CLSKSPNKHNRLFM A P+ + LPEDID+G +NPR DFK RAR L + Y ++
Sbjct: 558 SDKSNQMCLSKSPNKHNRLFMTAGPLEEKLPEDIDDGCEINPRQDFKIRARYLADTYGWD 617
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 86.2 bits (204), Expect = 1e-17
Identities = 36/84 (42%), Positives = 61/84 (72%)
Frame = +2
Query: 2 FSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL 181
F+ +++AVEP NP++LPK+++GL+++ KS P++ EESGEH++ G GEL+L+ +
Sbjct: 450 FNTCSTIKIAVEPHNPSELPKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCIM 509
Query: 182 KDLEEDHACIPIKKSDPVVSYRET 253
DL ++ I IK +DPV+++ ET
Sbjct: 510 HDLRRMYSEIDIKVADPVIAFCET 533
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 259 EESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 372
E S C +++PNK N++ M A+P+ GL EDI+ +V
Sbjct: 536 ETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEKV 573
>SB_12004| Best HMM Match : EFG_C (HMM E-Value=1.2e-15)
Length = 549
Score = 52.4 bits (120), Expect = 2e-07
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = +2
Query: 134 EHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRET 253
EH++ AGE+HL+ C+ DL+ +AC+ + SDP++ +RET
Sbjct: 2 EHVIIAAGEVHLQRCVDDLKRRYACVELNVSDPIIPFRET 41
>SB_1790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 34.7 bits (76), Expect = 0.034
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 53 DLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEI 175
DL + + + R + DP + ++ES E I++G GELHL++
Sbjct: 36 DLDQFSKAINRFTREDPTFRVRFDDESKETIISGMGELHLDV 77
>SB_14902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -1
Query: 327 LSLHEQTVVLVGRL*ETELVRFLSSVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAP 148
LSL ++L+G++ + L LS +S + D + G+ W ++RS++ + + P+
Sbjct: 150 LSLFCNVLLLIGKIVASYLSGSLSIISSLVDSAVDLVSGIIFWYTTRSIKTTNFYEYPSG 209
Query: 147 ATMCSPDSSLI 115
T P + +I
Sbjct: 210 KTRLEPVAVII 220
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.9 bits (64), Expect = 0.97
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -1
Query: 117 IHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTTGD 10
I C MG D RLR ST L R F+GS T D
Sbjct: 1062 IECNMGFDAVMRLRTSTGL-RPVDFVGSFYMSNTTD 1096
>SB_30434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 304 CACWATLRDRAGPIPQLGLTVRHDRVRLLDWNASMVLLKILKTDLK 167
CA T GP P G T+RH+R L N + L++D++
Sbjct: 3 CAIDRTPPYSGGPQPDFGRTIRHNRTNTLSINKKKLSGCFLRSDVR 48
>SB_30569| Best HMM Match : 3-alpha (HMM E-Value=6)
Length = 160
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 101 PMVQCINEESGEHIVAGAGELHLEICLKDLEE 196
P Q + E EH+VA +G+L E C K L +
Sbjct: 26 PTWQRVKEFQNEHLVAQSGKLRFEACKKTLSK 57
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 250 DRAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDI-DEGRVNPRDD 387
+R ++SD S+SP + M+A + D+ D+G+ NP ++
Sbjct: 883 NRPKDSDDTATSRSPRSKGKRVMQADASRSDVSLDVPDKGQTNPEEE 929
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 262 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTR 399
E D+ CL + P + M P+ D GR PRDD K +
Sbjct: 51 EGDEPCLMEKPREPRNNDMNTTHYGGKTPDPRDGGRDGPRDDEKQK 96
>SB_30916| Best HMM Match : C2 (HMM E-Value=1.2e-17)
Length = 809
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 274 LCLSKSPNKHN--RLFMKAQPMPDGLPEDIDEGRVNPRD 384
+ L K N H+ LF K + +P L ED++EG V D
Sbjct: 241 MLLLKRLNLHHLMSLFCKTKKLPVALSEDLEEGEVTEED 279
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 292 PNKHNRLFMKAQPMPDGLPEDIDEGRVNPRD 384
PN N F+KA P+ DG D + G + RD
Sbjct: 413 PNTGNTEFVKAIPIEDGESHDSNYGTIESRD 443
>SB_7387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +2
Query: 89 AKSDPMVQ---CINEESGEHIVAGAGELHLEICLKDLEEDH 202
AK DP + C NE+SGEH + GE +L I ++ +++D+
Sbjct: 7 AKIDPNLGTRICFNEDSGEH-YSCHGEENLAISMEGMDKDY 46
>SB_50657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.3 bits (60), Expect = 3.0
Identities = 26/94 (27%), Positives = 41/94 (43%)
Frame = +2
Query: 143 VAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETELRNRTSSVSQSRPTSTTVCS*R 322
++GA L+ D ++ C P + VS R T T + S + T +
Sbjct: 18 ISGALVCDLDDDCGDESDERGCAPSAATQ--VSGRTTPRATTTPKKATSETMNFTKPAGI 75
Query: 323 LSPCLMVCQRTLMRVA*IPAMTSRLALGSLQKST 424
LSP ++ QRT +R IP+ T + L + ST
Sbjct: 76 LSPVVLSTQRTFLRTTPIPS-TVKPRLTTTNSST 108
>SB_28265| Best HMM Match : Ank (HMM E-Value=6.3e-20)
Length = 165
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 62 KLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLK 184
++V+ L A DP + +N S H A G+LH CLK
Sbjct: 119 EVVKWLVEKANCDPGAKTLNRMSAIHFAASGGDLH---CLK 156
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 4/22 (18%)
Frame = +1
Query: 328 PMPDGLPEDIDEGR----VNPR 381
P+PDG+ E+IDEG+ +NPR
Sbjct: 721 PVPDGIYEEIDEGQIYDIINPR 742
>SB_26912| Best HMM Match : C2 (HMM E-Value=1.4e-17)
Length = 232
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 310 LFMKAQPMPDGLPEDIDEGRVNPRD 384
LF K + +P L ED++EG V D
Sbjct: 57 LFCKTKKLPVALSEDLEEGEVTEED 81
>SB_24363| Best HMM Match : COesterase (HMM E-Value=1.7e-16)
Length = 635
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 318 HEQTVVLVGRL*ETELVRFLSSVSRYDTTGSDFLIGMQ 205
H ++VG + E EL + + + TG DFLIGMQ
Sbjct: 523 HHFPALMVGPVTEVELK---TRIQNMNLTGKDFLIGMQ 557
>SB_20695| Best HMM Match : YscO (HMM E-Value=4)
Length = 192
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 253 RAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDID 360
R + SDQL S ++H RLF+ P G D+D
Sbjct: 103 RDQASDQLLDRLSESQHQRLFITETPDRFGNQRDVD 138
>SB_5829| Best HMM Match : S4 (HMM E-Value=4.2)
Length = 893
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 330 GLSLHEQTVVLVGRL*ETELVRFLSSVSRYDTT 232
GL H T+ VG+L + + FLS + + DTT
Sbjct: 324 GLKNHAVTMFEVGKLTDESMDSFLSELEKVDTT 356
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 176 CLKDLEEDHACIPIKKSDPVVSYRETELRNRTSSVSQSRPTSTT 307
C K +D ACI + ++ PV++ E+ N T +S P S T
Sbjct: 1636 CGKHARQDVACIEMVQTSPVLN--NIEILNSTGDGVKSLPNSDT 1677
>SB_36347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 144 TMCSPDSSLIHCT 106
TMC PD+SL +CT
Sbjct: 406 TMCKPDTSLFNCT 418
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 26.6 bits (56), Expect = 9.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 278 QSWSDSSARSHGTTR 234
Q W D+ A+SHGTT+
Sbjct: 855 QDWMDTFAKSHGTTK 869
>SB_44311| Best HMM Match : EGF (HMM E-Value=0.048)
Length = 266
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 44 NPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLK 184
NP+ P + L K M +CI +ESG + + ICLK
Sbjct: 38 NPSPTPPTALLITPLTKQTYMTRCITKESGSSLNTPSCVPFSPICLK 84
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 213 GMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGS 34
G ++ S S +R +P P T S + GS + P+T+ R++ +
Sbjct: 181 GSRSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESA 240
Query: 33 TATRTTGDT 7
TRTT T
Sbjct: 241 RGTRTTTTT 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,212,174
Number of Sequences: 59808
Number of extensions: 300681
Number of successful extensions: 822
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 859323430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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