Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0930
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.9  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.7  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   6.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 283 NIMRQRERPKSELWSFGVSLLKL 215
           ++  QR    S++WSFGV L ++
Sbjct: 665 SLTHQRYTTYSDVWSFGVLLWEI 687


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 436 RRLLNYDKRLQGDKIVT*KKKNL-IFLNAFHRKCNKMVLGRHQY 564
           RR +N    L G ++V     ++ ++LNA+H     M L RH++
Sbjct: 54  RRYMN--AHLSGIQLVVRNLLDISLYLNAYHVFVTMMTLKRHKW 95


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 375 ANVTRLVTSRINTFQSNRQ 319
           A + +L++  INTF SN++
Sbjct: 17  AEIAQLMSLIINTFYSNKE 35


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 608 NELTLIIILI*RGCTY*CRPKTILLHLRW 522
           NE  L + LI   C+Y  R K +    RW
Sbjct: 153 NENALDVDLIGNVCSYVVRDKLLKAFTRW 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,941
Number of Sequences: 336
Number of extensions: 2316
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)