Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0927
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 62 3e-10
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 54 7e-08
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 51 7e-07
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 50 2e-06
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 50 2e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 50 2e-06
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 50 2e-06
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 49 4e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 48 5e-06
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 48 6e-06
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 48 8e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 48 8e-06
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 48 8e-06
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 47 1e-05
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 46 3e-05
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 45 4e-05
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 45 4e-05
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 1e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 43 2e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 42 6e-04
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 41 7e-04
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 39 0.003
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 38 0.005
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.007
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 38 0.007
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 36 0.027
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 31 0.59
SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.8
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 29 2.4
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 29 2.4
SB_18541| Best HMM Match : PAN (HMM E-Value=0.0099) 29 2.4
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 29 3.1
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 3.1
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 28 5.5
SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29) 28 5.5
SB_13378| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_48237| Best HMM Match : zf-P11 (HMM E-Value=6.5) 28 7.2
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 7.2
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAPAL 288
RIV G +A G+ P A L P G CGG++VH +WV+TA+HC+ D + +
Sbjct: 210 RIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTHI 269
Query: 289 RT*PLRN---TFRNRQNGXXXXXXXXXXXNLV---QPNDISLLRLHRPVVFTRYLQPIRV 450
+ N Q NL ND++L+RL +P + TRY+QP+ +
Sbjct: 270 ISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCL 329
Query: 451 QSSADAF 471
+F
Sbjct: 330 ADGTVSF 336
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 94 DTTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWS 273
D+ + R+VSG +AT G+ P A L + P G F CGGS++ +WV+TA HC+
Sbjct: 56 DSASSRVVSGDDATLGEWPWQAWLHVT-PHG--FVCGGSLIAPQWVLTAGHCILTEDPEK 112
Query: 274 FAPALRT*PLRNTFRNRQ--NGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPI 444
+ L T + Q + ++ ND++LL+L RP T ++ +
Sbjct: 113 YRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTSFVNTV 171
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +1
Query: 91 VDTTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVA 255
V ++ RIV G A PG P A LR T G CGGS++H WV+TAAHC++
Sbjct: 384 VSSSTSRIVGGAAANPGDWPWQAQLRT---TTGFPYCGGSLIHSNWVLTAAHCIS 435
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/48 (58%), Positives = 32/48 (66%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RIV G +A PG P A LR GG F CGG++VH +WVITAAHCV
Sbjct: 139 RIVGGTKAPPGAWPWQAMLR--SNYGGQF-CGGTLVHPQWVITAAHCV 183
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 54.0 bits (124), Expect = 1e-07
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVA-------DASR 267
RIV G + G +P H +R GG ACGGS++ +WV+TAAHCV SR
Sbjct: 107 RIVGGHDTVKGAYPWHVLIR----KGGHVACGGSLISEKWVLTAAHCVTHRNGNILPRSR 162
Query: 268 WSFAPALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIR 447
+ L L N + + +++ D++L++L + + Y++PI
Sbjct: 163 FQVQLGLYRTTLPNEPQVQLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPIC 222
Query: 448 VQSSAD 465
+ + D
Sbjct: 223 LPETDD 228
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 100 TNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADAS 264
T R++ G +A PG P AL+ + G F CGGS+V WV+TAAHCVA +S
Sbjct: 473 TQSRVIGGKDAIPGAWPWQIALK----SRGNFICGGSLVSSTWVVTAAHCVARSS 523
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 52.4 bits (120), Expect = 3e-07
Identities = 47/137 (34%), Positives = 60/137 (43%), Gaps = 4/137 (2%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAPAL 288
RIV G A PG P L + +G F CGG++V EWVITAAHCV D + S L
Sbjct: 630 RIVGGSTAPPGAWPWQVML--IYNSGRQF-CGGTLVTPEWVITAAHCVVDKNPASIQVRL 686
Query: 289 ----RT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIRVQS 456
RT P + R + NDI+LLRL RP + T + + +
Sbjct: 687 GAQDRTSP-DPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPN 745
Query: 457 SADAFRNYDGLTVYASG 507
F N G Y +G
Sbjct: 746 DTVHFPN--GTMCYITG 760
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 51.2 bits (117), Expect = 7e-07
Identities = 39/116 (33%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Frame = +1
Query: 100 TNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRW-SF 276
T RIV G EA PG P AL + G CGGS+V+ WV+TA HC + W S
Sbjct: 50 TRKRIVGGVEAAPGAWPWQVALLM----NGTQFCGGSLVNENWVVTARHCFHEL--WSSM 103
Query: 277 APALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPI 444
A T L G + I+LLRL +P Y+ PI
Sbjct: 104 DTASWTASLGEHHLVTSEGFEQSSRSNALSFTQRTTWITLLRLAKPAKLDEYVSPI 159
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 50.4 bits (115), Expect = 1e-06
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV---ADASRWSFA 279
R+V+G A P +LR+ G CGGS++ ++WV+TAAHCV S ++
Sbjct: 31 RVVNGDNAQQHSWPWQISLRV----NGRHICGGSLIAKDWVVTAAHCVDRNPTPSGYTVV 86
Query: 280 PAL--RT--*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIR 447
RT P++NTFR +Q +L NDI+LL+LH PV + + +
Sbjct: 87 VGAHHRTGNTPVQNTFRLKQ---LFKHEQFSMRHL--KNDIALLQLHEPVKASDKVNTVC 141
Query: 448 VQSSADAFRNYDGLTVYASG 507
+ SS R G Y +G
Sbjct: 142 LPSSGS--RAQAGARCYITG 159
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 259 RIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHCL 303
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFA-CGGSIVHREWVITAAHCVA 255
R+++G +AT P +LR++ G + CGGS++ EWV+TAAHCVA
Sbjct: 37 RVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVA 86
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RIV G EA P A LR GG CGGS++H EWV+TAAHC+
Sbjct: 219 RIVGGTEAPVNGWPWQAMLR---SAGGSQFCGGSLIHPEWVLTAAHCL 263
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVA 255
RIV G A G P A LR T G CGGS++H +WV+TA HCV+
Sbjct: 663 RIVGGTAAKQGDWPWQAQLR---STSGFPFCGGSLIHPQWVLTATHCVS 708
Score = 44.8 bits (101), Expect = 6e-05
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 187 GVFACGGSIVHREWVITAAHCVADASRWSFAPALRT*PLRNTFR-NRQNGXXXXXXXXXX 363
G F CGGS+V WV+TAAHC+A +S + +RN+ Q
Sbjct: 89 GSFICGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPT 148
Query: 364 XNLVQ-PNDISLLRLHRPV 417
N Q NDI+L+ L PV
Sbjct: 149 YNSPQLSNDIALIELSSPV 167
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/147 (23%), Positives = 63/147 (42%)
Frame = +1
Query: 106 LRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAPA 285
+RIV G EA P P ++R+ G CGGS++ W++TAAHCV ++ +
Sbjct: 29 VRIVGGDEAVPHSWPWQVSIRLK----GSHICGGSLLSPLWLLTAAHCVIRSNNSADYTV 84
Query: 286 LRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIRVQSSAD 465
+ R + +D++L++L +P F+ + P+ + D
Sbjct: 85 IVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPVCLPKQGD 144
Query: 466 AFRNYDGLTVYASGLVVSGRMVLLRGP 546
+ + +A+G +G+ L P
Sbjct: 145 LMKERE--NCFATGKSANGKTALTSNP 169
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 85 KDVDTTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHC 249
+D RIV G EA G P AA+ + G F CGG+++ R+WV+TAAHC
Sbjct: 715 RDSSDKRFRIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHC 765
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 48.8 bits (111), Expect = 4e-06
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 7/158 (4%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV---ADASRWSFA 279
R+VSG E P P L + CGG+++ REWV+TAAHCV D S +
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHCVFQEPDVSHYKVI 102
Query: 280 PALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIRVQSS 459
++ + + DI+LL+L RP V +++ + +
Sbjct: 103 LGDFNRDIKEPTEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCL--P 160
Query: 460 ADAFRNYDGLTVYASGL----VVSGRMVLLRGPELGIL 561
A R +G + +G + + V LR +L I+
Sbjct: 161 AQGSRALEGTMCFITGWGKTNITEDKSVTLREAQLPIV 198
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 DINKDVDTTNLRIVSGWEATPGQHPHHAALRI--VDPTGGVFACGGSIVHREWVITAAHC 249
+ +K + LRI G ++ PG +P AL F CGG+++ +WV+TAAHC
Sbjct: 1149 ETSKPTNHKRLRIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
Query: 250 V 252
V
Sbjct: 1209 V 1209
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 48.4 bits (110), Expect = 5e-06
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVA--DASRW 270
R++SG EA G+ P A L + TG F CGGS+V WV+TAAHC+ DAS++
Sbjct: 31 RVISGSEALLGEWPWQAWLHL-QHTG--FICGGSLVAPGWVLTAAHCILSDDASKY 83
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 48.4 bits (110), Expect = 5e-06
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV-----ADASRWS 273
R+V G EA GQ P AL CGG++VH WV+T AHC D W+
Sbjct: 28 RVVGGDEAKAGQFPWQIALLFKRQQ----YCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 274 FAPALRT*PLRNTFRNRQ-------NGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRY 432
+ +F R+ + + DI+L+ L RPVVF +
Sbjct: 84 VTLGEYNLAVNESFEQRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVFNFH 143
Query: 433 LQPIRVQSSADAFR 474
+QPI + +F+
Sbjct: 144 VQPICIMRPNISFK 157
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Frame = +1
Query: 112 IVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAPALR 291
I+ G A G+ P ++++ + + CGG+++ WV+TAAHCV D + +
Sbjct: 546 IMGGANAEHGEWPWQVSMKL-NSSSLPHICGGNVISPWWVLTAAHCVQDERASNIKLTMG 604
Query: 292 T*PLRNTFRNRQ--NGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIRVQSS 459
L N Q N V D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 605 EWRLFNVDGTEQVIPVERIISHANYSYNTVD-YDYALLKLTRPLNFTQYVQPVCLPDS 661
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +1
Query: 103 NLRIVSGWEATPGQHPHHAALRIVDP--TGGVFACGGSIVHREWVITAAHCVA---DASR 267
N RIV G A G P ++ V T CGGS+V EW++TAAHC A DA
Sbjct: 101 NTRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSKDAKD 160
Query: 268 WSFAPALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIR 447
++ A + + R + + D++L++L P+ + ++P+
Sbjct: 161 YTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVC 220
Query: 448 VQS 456
+ S
Sbjct: 221 LPS 223
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 47.6 bits (108), Expect = 8e-06
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRI-VDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAPA 285
RIV G A P A L+ +D T CGGS+++REWV+TAAHC+ +
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDDT---IVCGGSLINREWVVTAAHCIDRNNPSRTGCV 488
Query: 286 LRT*PLR------NTFRNRQN----GXXXXXXXXXXXNLVQPNDISLLRLHRPV-VFTRY 432
+ P+R + ++ N + ND++L+RL P+ FT++
Sbjct: 489 VPDPPIRVILGESDVTKHEGNEIHRDVAQICIHPDYHEIKLTNDLALIRLRTPITTFTKH 548
Query: 433 LQPIRVQSSA 462
++P+ + +SA
Sbjct: 549 VRPVCLPTSA 558
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +1
Query: 100 TNLR--IVSGWEATPGQHPHHAALRIVDPTGGVFA-CGGSIVHREWVITAAHC 249
TNLR IV G EA G P + D +G CGG++++REWV+TAAHC
Sbjct: 121 TNLRARIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHC 173
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/50 (48%), Positives = 29/50 (58%)
Frame = +1
Query: 103 NLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
N RIV G A G P A LR + G CGG++VH WV+TA+HCV
Sbjct: 246 NSRIVGGTTAQRGAWPWQAMLRYYN---GNHFCGGTLVHPRWVVTASHCV 292
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADAS 264
RIV G A P A LR T G CGGS++H +W++TA HCV+ S
Sbjct: 53 RIVGGTAAKQNSWPWQAQLRT---TSGFPYCGGSLIHPQWILTATHCVSGKS 101
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +1
Query: 103 NLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 282
N RIV G A G P A LR T G CGGS++ +W++TA HCV S
Sbjct: 8 NTRIVGGTAAKHGDWPWQAQLRT---TSGFPYCGGSLIAPQWILTATHCVERKQASSIVI 64
Query: 283 ALRT*PLRNTFRNRQNGXXXXXXXXXXXN--LVQPNDISLLRLHRPVVFT 426
L T ++ + +DI+LL+L +PV++T
Sbjct: 65 RLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALLKLDKPVLYT 114
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 97 TTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHC 249
T RIV G E+ G P AAL + G CGGS++ +WV+TAAHC
Sbjct: 22 TRKRRIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHC 69
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSF 276
R+++G A P P +LR P G +CGG+++ WV+TA+HCV R S+
Sbjct: 29 RVINGQNAQPHSWPWQISLR---PYGRYHSCGGTLISDRWVVTASHCVHKNPRPSY 81
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWS 273
RIV+G EA P A+LR CG +++ W ITAAHCV +++
Sbjct: 325 RIVNGQEAVSHSWPWIASLR--KGRSNYHTCGATLIRPGWAITAAHCVMRPDKYT 377
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV-ADASRW 270
RI+ G +T QHP A+ + ACGGS+V +W++TAAHC ++ RW
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCFDSNRLRW 90
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVAD 258
R+V+G A P +LR+ G CGGS++ EWV+TAAHCV D
Sbjct: 80 RVVNGDNAAQHSWPWQISLRV----NGRHICGGSLITPEWVLTAAHCVED 125
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RI+ G A P P A + I CGG+++ EWV+TAAHCV
Sbjct: 284 RIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHCV 331
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RI++G A P P +LR G CGGS++ WV+TAAHC+
Sbjct: 105 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAAHCI 149
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAA 243
RI++G A P P +LR G CGGS++ WV+TAA
Sbjct: 428 RIINGQNAQPHSWPWQISLR---GRSGFHTCGGSLISDRWVVTAA 469
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
R+V+G A P +LR T G CGGS++ EWV+TAAHCV
Sbjct: 37 RVVNGANAPQHAWPWQISLR----TNGQHICGGSLITPEWVLTAAHCV 80
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 282
RIV G EA+P P L + G CGGS++ ++WV+T+ HC D +++ P
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCF-DQRPYAYIP 302
Score = 30.3 bits (65), Expect = 1.4
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHC 249
CGGS++ W++T++HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RIV G EA P A L + P G F CGGS++ WV+TAAHC+
Sbjct: 29 RIVGGTEAPINGWPWQAML-LRSPNGDQF-CGGSLIDPGWVLTAAHCL 74
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADAS 264
RI++G EA P P +LR+ G CG S++ W +TAAHCV +S
Sbjct: 85 RIINGEEAVPNSWPWQLSLRVY----GSHNCGASLLSPGWALTAAHCVQRSS 132
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
R++ G +A P P +LR+ G CGG+++ +WV+TA HCV
Sbjct: 435 RVIGGEDAAPHSWPWQISLRV----RGKHMCGGTLISPDWVLTAGHCV 478
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVF-ACGGSIVHREWVITAAHCVAD 258
RI++G A P P +LR G F CGG+++ WV+TA+HC+ D
Sbjct: 845 RIINGQNAQPHSWPWQISLR----QGRRFHLCGGALISDRWVVTASHCIHD 891
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVAD 258
R++ G A P P ++ + G + +CGG+++ +WVITAAHCV +
Sbjct: 476 RVIGGEAARPYSWPWQVSVSM----GKLHSCGGALISSKWVITAAHCVIE 521
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/122 (24%), Positives = 47/122 (38%)
Frame = +1
Query: 187 GVFACGGSIVHREWVITAAHCVADASRWSFAPALRT*PLRNTFRNRQNGXXXXXXXXXXX 366
G CGGS++ WV+TAAHCV + S + R
Sbjct: 336 GHHICGGSLLSSTWVLTAAHCVIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYKHEKYVG 395
Query: 367 NLVQPNDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGLVVSGRMVLLRGP 546
+ +D++L+RL +P F+ + P+ + D N G VSG M+
Sbjct: 396 GKDKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTTGWGR-VSGSMMFFMAT 454
Query: 547 EL 552
+L
Sbjct: 455 KL 456
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCVA----DASRWSFAP------ALRT*PLRNTFRNRQNGXXXXX 348
CGGSIV+ +W++TAAHCV ASR++ L L + QN
Sbjct: 1809 CGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEGI 1868
Query: 349 XXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIRVQSSA 462
N + DI+LL+L +P+ F Y+ + + +A
Sbjct: 1869 VVHPSYNDLD-YDIALLKLRQPITFNAYVSQVCLPQAA 1905
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RI+SG +A P P + CGG++V +WV+TAAHCV
Sbjct: 351 RIISGSDAQPNSWPWMVQINY----NNGHHCGGTLVSPQWVVTAAHCV 394
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
RIV G A P A LR G CGG++VH +V+TA+HC+
Sbjct: 23 RIVGGTAAPKNAWPWQAQLR---SASGFPFCGGTLVHPRFVVTASHCI 67
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWS--FAP 282
RIV G EA P + + P CGGS++ W++T++HC + S F
Sbjct: 245 RIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEI 304
Query: 283 ALRT*PLR--NTFRN-RQNGXXXXXXXXXXXNLVQPN--DISLLRLHRPVVFTRYLQPIR 447
L +R F Q +L+ P D++L++L RP VF + + +
Sbjct: 305 RLGEHDVRKYEGFEEIIQGDKLYIHPGLVVGDLISPGDYDVALIKLKRPAVFHKCVYSVC 364
Query: 448 VQS 456
+ S
Sbjct: 365 LPS 367
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 151 HHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 282
+HA + +V G CGGS++ ++WV+T+ HC D +++ P
Sbjct: 546 YHAQVDLV-VNGTRHNCGGSLIDKQWVVTSGHCF-DQRPYAYIP 587
Score = 35.1 bits (77), Expect = 0.048
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCV 252
CGGSI+ WV+TA HCV
Sbjct: 10 CGGSIIDPHWVVTAGHCV 27
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 112 IVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASR 267
I+ G +A G+ P +L + G V CGG+++ EWV+TAA C D R
Sbjct: 258 IIGGTDAAVGEWPWQVSLYLTH-YGPV--CGGTLLTSEWVLTAARCFRDNKR 306
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 97 TTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
T LRIV+G +A P P + R G CG S++ W +TAAHC+
Sbjct: 236 TPPLRIVNGEDAVPHSWPWQLSFRYK----GSHICGASLLTPGWALTAAHCL 283
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVAD 258
RIV G ++ G P AL + D C GS++ W+ITA HC D
Sbjct: 53 RIVGGVVSSEGLWPWQVALLLNDRQ----VCAGSLIEARWIITAGHCFKD 98
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 88 DVDTTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
+ D NL GW+ AL + C G++V +EW++T AHC+
Sbjct: 656 EADLANLAATPGWQPAHANSWPWTALLHFGGFLDIEGCMGTLVDQEWIMTTAHCL 710
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 34.3 bits (75), Expect = 0.083
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCVADAS---RWSFAPALRT*PLRNTFRNRQNGXXXXXXXXXXXN 369
CGG+++ +WV+TAAHC S W+ + R + + +
Sbjct: 1266 CGGALIAADWVLTAAHCFDRFSMPPEWTVQVGVSD-MRRRDGKGQSLSIKAIFVHPQYNS 1324
Query: 370 LVQPNDISLLRLHRPVVFTRYLQPIRVQSSAD 465
+D+++L+L +P F + PI + ++ +
Sbjct: 1325 SSHEHDLAVLQLQQPAEFNSRVSPICIVANEE 1356
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 382 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGLV 513
+DI+L+RL +PV FT Y++PI + S+A +Y L SG +
Sbjct: 209 SDIALIRLAQPVTFTDYVKPICLPSAAS---DYAQLQANVSGTI 249
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 31.5 bits (68), Expect = 0.59
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Frame = +1
Query: 190 VFACGGSIVHREWVITAAHCVADASRWSFAPALR-T*PLRNTFRNRQ------NGXXXXX 348
V C G+++ VITAAHC+ + +W +P + NT + G
Sbjct: 150 VMQCSGTLIGPCHVITAAHCIHN-GKWFVSPLTAILVGVSNTSSTDELDYFAVEGIYLPP 208
Query: 349 XXXXXXNLVQPNDISLLRLHRPV-VFTRYLQPIRVQSSADA----------FRNYDGLTV 495
+ +D +LL+L P + ++P+R+Q+ F++Y V
Sbjct: 209 EWLSGKDFSHEHDYALLKLTEPTNIPYMDIKPLRIQTGTQCKILGDFGEGMFKHYCDAVV 268
Query: 496 YAS--GLVVSGRMVLLRGPEL-GIL 561
+S G+ VSGR+ R P L GIL
Sbjct: 269 GSSGAGMYVSGRLAHARKPVLVGIL 293
>SB_45214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 31.1 bits (67), Expect = 0.78
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 28 LCGQSLSQKVKPYFIEDINKDVDTTNL 108
LCGQ LS+K++PY ++ ++ D T +
Sbjct: 161 LCGQKLSRKIEPYIVQVVDSFKDYTRV 187
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 385 DISLLRLHRPVVFTRYLQPIRVQSS 459
D +LL+L RP+ FT+Y+QP+ + S
Sbjct: 388 DYALLKLTRPLNFTQYVQPVCLPDS 412
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCVADAS 264
C G++V WV+TAA C+ +S
Sbjct: 52 CSGALVSPRWVVTAASCLKQSS 73
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCVADASRW 270
C G+++ V+T+AHCV D+S +
Sbjct: 179 CTGTLISTRHVLTSAHCVHDSSEY 202
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 195 CLRWLYRPQGVGDHCSSLCCGRITVVIRAGVTNLTTPEYISESTEWYN 338
C WL G G + + L GR + G+ +L P YISE+ + N
Sbjct: 122 CSGWLLI--GFGKNAAMLNAGRFMSGLGVGMASLNVPVYISETASFSN 167
>SB_18541| Best HMM Match : PAN (HMM E-Value=0.0099)
Length = 162
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 559 LACCRNPTCASTSAPDYAECDLRR 630
L C +NP C S + D+ EC+L R
Sbjct: 62 LLCLKNPKCNSMNFYDFGECELLR 85
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 385 DISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASG 507
D++LLRL P FT Y+ PI + FR G Y +G
Sbjct: 79 DVALLRLATPAKFTNYVYPICLLPQGARFR--PGKYCYVTG 117
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +1
Query: 199 CGGSIVHREWVITAAHCV 252
C G+++ R+ V+T+AHCV
Sbjct: 168 CSGTLISRQHVLTSAHCV 185
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 382 NDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYASGLV 513
NDI++L+L RP + + + + +++ + F L + GLV
Sbjct: 1185 NDIAVLKLARPAILNKRVNVVCMENETNIFPGLVTLVLVTKGLV 1228
>SB_2610| Best HMM Match : F5_F8_type_C (HMM E-Value=4.5e-29)
Length = 334
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 37 QSLSQKVKPYFIEDINKDVDTTNLRIVSGWEATPGQHPHHAALRIVDPTGG 189
+ + K P +ED + T++ S W PG +PHHA L P GG
Sbjct: 144 EGCANKPHPLGMED--GSIQNTSITASSHW-IEPGHNPHHARLN-NQPVGG 190
>SB_13378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -2
Query: 561 KYTQFRTSE*HHSSRDDQTAGIHGESVVVPEGISRRLHTNWLEVSC 424
+ T+ TSE H + +HG S + G+SR + + +SC
Sbjct: 13 RITRQLTSEYQHCKSYSTVSRLHGTSSRLSNGLSRSVREQFANISC 58
>SB_48237| Best HMM Match : zf-P11 (HMM E-Value=6.5)
Length = 173
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 546 RTSE*HHSSRDDQTAGIHGESVVVPEGISRRLHTNWL 436
R+S H R + + + G + P G+ R T+WL
Sbjct: 78 RSSSSSHVLRSESSGSLGGSGQITPSGVRRAQVTSWL 114
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 449 CNRRLMPSGTTTDSPCMPAVWSSLDEWCYSE 541
C+RR T+ PC P V SS DE +E
Sbjct: 2659 CDRRFTSKINLTNHPCRPEVQSSSDEQLTTE 2689
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 449 CNRRLMPSGTTTDSPCMPAVWSSLDEWCYSE 541
C+RR T+ PC P V SS DE +E
Sbjct: 3369 CDRRFTSKINLTNHPCRPEVQSSSDEQLTTE 3399
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 449 CNRRLMPSGTTTDSPCMPAVWSSLDEWCYSE 541
C+RR T+ PC P V SS DE +E
Sbjct: 3789 CDRRFTSKINLTNHPCRPEVQSSSDEQLTTE 3819
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 449 CNRRLMPSGTTTDSPCMPAVWSSLDE 526
C+RR T+ PC P V SS DE
Sbjct: 3159 CDRRFTSKINLTNHPCRPEVQSSSDE 3184
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 193 FACGGSIVHREWVITAAHCVAD 258
+ C G +V + V+TAAHCVA+
Sbjct: 122 WGCTGVLVGPKHVLTAAHCVAN 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,139,340
Number of Sequences: 59808
Number of extensions: 526938
Number of successful extensions: 1649
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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