Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0927
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    47   1e-05
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    37   0.010
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    35   0.042
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81517-1|CAB04208.1|  520|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z69904-10|CAA93782.2|  754|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z69902-13|CAA93770.2|  754|Caenorhabditis elegans Hypothetical p...    28   4.8  
Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    27   8.4  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
 Frame = +1

Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASR-WSFAPA 285
           R+V G+E  PG  P  AALR  +       CG SI+ +  +ITAAHC  +  R  S+   
Sbjct: 26  RVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVV 83

Query: 286 LRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRP-VVFTRYLQPIRVQS 456
           +       T  N Q               +  +DI++L +  P + F  Y QPI + S
Sbjct: 84  VGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 37.1 bits (82), Expect = 0.010
 Identities = 30/123 (24%), Positives = 55/123 (44%)
 Frame = +1

Query: 88  DVDTTNLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASR 267
           D  T + R++ G E++P   P    ++++   G    CGGS++   +V+TAAHC A   R
Sbjct: 50  DYVTLDHRLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFA-KDR 105

Query: 268 WSFAPALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRLHRPVVFTRYLQPIR 447
              + ++R    R+   +                     D +++R+H PV  +   +PI 
Sbjct: 106 RPTSYSVRVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPIC 165

Query: 448 VQS 456
           + S
Sbjct: 166 LPS 168


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 27/101 (26%), Positives = 39/101 (38%)
 Frame = +1

Query: 103 NLRIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFAP 282
           + RI+ G     G +     +   D   G+  CG +++   W++TAAHC       SF  
Sbjct: 35  SFRIIGGNSIDDGANWMAKLVSYGDNGQGIL-CGATVIDDFWLVTAAHCALQLQTRSFVY 93

Query: 283 ALRT*PLRNTFRNRQNGXXXXXXXXXXXNLVQPNDISLLRL 405
                P  N  R R              N    NDI+LLR+
Sbjct: 94  VRE--PKNN--RERSFSVKEAYIHSGYNNQTADNDIALLRI 130


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 112 IVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCV 252
           I++G+ A        A++    P G    CGG ++    VIT+AHCV
Sbjct: 17  IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHCV 63


>Z81517-1|CAB04208.1|  520|Caenorhabditis elegans Hypothetical
           protein F28B1.1 protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 406 HRPVVFTRYLQPIRVQSSADAFR-NYDGLTVYASGLVVSG 522
           ++PVVF+   +PI +   A A    Y+ +T +AS  VV+G
Sbjct: 466 YKPVVFSANNEPIEISDQAPAIECAYNPMTNFASMWVVNG 505


>Z69904-10|CAA93782.2|  754|Caenorhabditis elegans Hypothetical
           protein ZK20.6 protein.
          Length = 754

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 16  FLLVLCGQSLSQKVKPYFIEDINKDVDTTNLRIV 117
           + L+LCG   +    PYF +DINK   T+  + V
Sbjct: 16  YALILCGTVDALPRAPYFNDDINKTTTTSEDKTV 49


>Z69902-13|CAA93770.2|  754|Caenorhabditis elegans Hypothetical
           protein ZK20.6 protein.
          Length = 754

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 16  FLLVLCGQSLSQKVKPYFIEDINKDVDTTNLRIV 117
           + L+LCG   +    PYF +DINK   T+  + V
Sbjct: 16  YALILCGTVDALPRAPYFNDDINKTTTTSEDKTV 49


>Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical
           protein F25D7.3 protein.
          Length = 817

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 14/62 (22%), Positives = 29/62 (46%)
 Frame = -2

Query: 561 KYTQFRTSE*HHSSRDDQTAGIHGESVVVPEGISRRLHTNWLEVSCKDDRSMESQ*RDVV 382
           +Y   R  +  H++    + G  G+  + P G    L T+W   +CK++   +S   D++
Sbjct: 603 QYVHLRLHKRLHANERPYSCGTCGKKYISPSG----LRTHWKTTTCKEEDMKDSMRDDLM 658

Query: 381 GL 376
            +
Sbjct: 659 DI 660


>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical
           protein ZK512.5 protein.
          Length = 1232

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +3

Query: 285 VTNLTTPEYISESTEWYNYTTYDHHAA*LGTA-QRHLFTETPSTGRLYKIPPANSCAIVG 461
           VTN    E  +  +E Y Y         LG+A   H+F   P   + YK+PP +  A V 
Sbjct: 213 VTNTLASEVYNSESESYYYGVVK-----LGSAIVDHVFRTMPPPEKYYKMPPIDRVAYVF 267

Query: 462 *C 467
            C
Sbjct: 268 YC 269


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 199 CGGSIVHREWVITAAHC 249
           CGG+++  + V+TAAHC
Sbjct: 62  CGGTLITLKHVLTAAHC 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,558
Number of Sequences: 27780
Number of extensions: 370459
Number of successful extensions: 1048
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)