Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0927
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   2e-04
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    28   0.066
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   7.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   9.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +1

Query: 109 RIVSGWEATPGQHPHHAALRIVDPTGGVFACGGSIVHREWVITAAHCVADASRWSFA 279
           RIV G      + P  A ++     G +  CG +I+ + +V+TAAHC+ D +    A
Sbjct: 160 RIVGGTNTGINEFPMMAGIKRTYEPGMI--CGATIISKRYVLTAAHCIIDENTTKLA 214


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 0.066
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -2

Query: 114 NTEICGIYIFVDIFNEVGLDFLGKALPTKHK 22
           N E+CGIY   +   ++ ++F+   +P +H+
Sbjct: 88  NEEVCGIYFLAEPDQKIEINFITFDIPCEHR 118


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 6/26 (23%)
 Frame = +3

Query: 231 DHCSSLCCGR------ITVVIRAGVT 290
           D C  +CCGR      +TVV R   T
Sbjct: 111 DGCDLMCCGRGYKTQEVTVVERCACT 136


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 309 YISESTEWYNYTTYDHHA 362
           Y+    +W  YTT + HA
Sbjct: 117 YLGGDLDWKYYTTNESHA 134


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +3

Query: 231 DHCSSLCCGR 260
           D C  +CCGR
Sbjct: 112 DGCDLMCCGR 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,642
Number of Sequences: 438
Number of extensions: 4715
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)