Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0927
(634 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containi... 29 2.6
At4g09570.1 68417.m01575 calcium-dependent protein kinase, putat... 29 3.4
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 29 3.4
At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /... 28 5.9
At3g51830.1 68416.m05684 phosphoinositide phosphatase family pro... 28 5.9
At3g42060.1 68416.m04315 myosin heavy chain-related 28 5.9
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 27 7.8
At4g25910.1 68417.m03725 nitrogen fixation protein, putative nit... 27 7.8
At2g14830.1 68415.m01680 expressed protein contains Pfam profile... 27 7.8
At1g30220.1 68414.m03697 sugar transporter family protein simila... 27 7.8
>At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containing
protein / ELM2 domain-containing protein / Myb-like
DNA-binding domain-containing protein similar to
BRG1-binding protein ELD/OSA1 [Homo sapiens]
GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT
DNA binding domain, PF01448: ELM2 domain, PF00249:
Myb-like DNA-binding domain
Length = 573
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 198 LRWLYRPQGVGDHCSSLCCGRITVV 272
LR+ RP + HCSS CC ++V
Sbjct: 307 LRYSIRPPNLSKHCSSSCCNGSSLV 331
>At4g09570.1 68417.m01575 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Arabidopsis thaliana] gi|604881|dbj|BAA04830;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 501
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 407 IDRSSLQDTSS-QFVCNRRLMPSGTTTDSPCMPAVWSSLDEWCYSEVLNWVYLRAVATRL 583
+DRS + S+ + +C+ ++ D P PAV S L ++ + + LR +A RL
Sbjct: 264 LDRSPKKRISAHEALCHPWIVDEHAAPDKPLDPAVLSRLKQFSQMNKIKKMALRVIAERL 323
Query: 584 APQ 592
+ +
Sbjct: 324 SEE 326
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 180 WIHYAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 64
WI A+G + L GS NT I ++F +FNEV
Sbjct: 903 WILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEV 941
>At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 447
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 73 EDINKDVDTTNLRIVSGWEATPGQHPHHAAL 165
E+ ++L +S W+ P QHPHH L
Sbjct: 325 EEFRNTTVNSDLHFIS-WDNPPKQHPHHLTL 354
>At3g51830.1 68416.m05684 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain ; Contains nonconsensus AT/AA
splice site at intron 7
Length = 588
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -2
Query: 222 PVDDRATASKHSAGWIHYAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEVGLDFL 49
P+D+ A++ + Y GG + +L G+ L + E G ++ + IF + FL
Sbjct: 48 PLDENASSGSPTRVSTIYGVGGTIRLLAGTYLLVITSREEVGNFLGLPIFRVTAMKFL 105
>At3g42060.1 68416.m04315 myosin heavy chain-related
Length = 712
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 64 YFIEDINKDVDTTNLRIVSGWEATPGQHPHHAA 162
+F + + VD TNL V+ W PG P H A
Sbjct: 301 FFAKLSDVSVDDTNLSCVNIWNFNPGFVPRHEA 333
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 180 WIHYAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 64
WI A+G + L G NT I ++F +FNE+
Sbjct: 902 WILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEI 940
>At4g25910.1 68417.m03725 nitrogen fixation protein, putative
nitrogen fixation protein nifU (SP:Q43885) [Anabaena
sp.]; contains Pfam profile: PF01106 NifU-like domain
Length = 236
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 576 VATARKYTQFRTSE*HHSSRDDQTAGIHGESVVVPEGISRRLHTNWLE 433
++TA K FR+S + + T G+ + G +R+H +WL+
Sbjct: 17 LSTAEKNPNFRSSLLNSKNAISDTLGVSSKCSTFLRGQFQRIHFSWLQ 64
>At2g14830.1 68415.m01680 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 454
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +2
Query: 467 PSGTTTDSPCMPAVWSSLDEWCYSEVLNWVYLRAVATRL---APQLRHLITPNAICA 628
PS +++ SP V +W WV R L +P L HL TP+ C+
Sbjct: 6 PSSSSSSSP-PKEVADETQDWILGAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCS 61
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 240 SSLCCGRITVVIRAGVTNLTTPEYISEST 326
S L GR+ V + G+ ++T P YISE++
Sbjct: 122 SLLVVGRVFVGLGVGMASMTAPLYISEAS 150
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,789,096
Number of Sequences: 28952
Number of extensions: 349706
Number of successful extensions: 976
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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