Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0923
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    25   0.79 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   1.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.4  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   4.2  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.2  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1

Query: 397 LILLEEETQFYINIYFDFLDILKSYLNFTRIWYNFSYFSQERGLKE 534
           L++ + + + Y  I  D LD+L+  +  + +W   S  S+E G K+
Sbjct: 169 LLVSDSDVESYKQIKSD-LDVLRQSVEKSELWVYKSKASEEHGNKK 213


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 545 FRNNYAILAIGLLG 586
           F NNY  LA+G++G
Sbjct: 403 FLNNYLFLAVGIVG 416


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 276 DQMIYYLTYINYCCNKIN 223
           D+M+Y++T++ Y  + +N
Sbjct: 360 DRMVYFITWLGYVNSALN 377


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 276 DQMIYYLTYINYCCNKIN 223
           D+M+Y++T++ Y  + +N
Sbjct: 360 DRMVYFITWLGYVNSALN 377


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = -1

Query: 276 DQMIYYLTYINYCCNKIN 223
           D+M+Y++T++ Y  + +N
Sbjct: 360 DRMVYFITWLGYVNSALN 377


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 533 SFNPLSCEKYEKLYQILVKLR 471
           S N + CEKYEK  +  ++++
Sbjct: 157 SHNDIYCEKYEKNGETYLRIK 177


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 373 SVNNIV--IAPAKTGSDNNNENAVIPTAH 293
           +VNN++     AK+ + NNN+N     AH
Sbjct: 407 NVNNLIKNTRCAKSNNQNNNQNKYKNQAH 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,048
Number of Sequences: 438
Number of extensions: 3480
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)