Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0919
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.1  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 218 PAKDTRTLHGDKYIFFKFLSE 280
           P+KDT  +  + Y+ F+F ++
Sbjct: 642 PSKDTIAVPNNGYVIFRFRAD 662


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 43  LDEDGNGLVIVDLP-IEAQPEDLEKAQLVDLPVENVAEPEDLSP 171
           L+ +G+ +  V +  ++  P++     LVD+  +   E EDL+P
Sbjct: 428 LNNEGSLVYNVQIENLKTTPDNTTFITLVDVSTKRRTELEDLTP 471


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 379 IHKLLVKKYKRINYLY 332
           +HK+LVK  + IN ++
Sbjct: 139 LHKILVKVVREINGIF 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,660
Number of Sequences: 336
Number of extensions: 2355
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)