Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0919
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.097
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.39
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 0.39
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.39
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 31 0.68
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 31 0.68
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 31 0.68
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 31 0.68
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 31 0.68
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 31 0.68
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 29 2.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 2.1
AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical ... 29 2.7
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 3.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 3.6
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical... 27 6.3
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.097
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -3
Query: 197 STMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGR-----STITSPFPSSSNSAG 33
S+ + + TG SSGS+T + G ST A S +++ ST+T+P SSS S
Sbjct: 1513 SSTSVPSSTGATSSGSST-TVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGS 1571
Query: 32 YSTQLIEPTS 3
STQ I P+S
Sbjct: 1572 SSTQSI-PSS 1580
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 0.39
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 158 SGSATFSTGRSTSWAFSKSSGCAS-IGRSTITSP--FPSSSNSAGYSTQLIEPTS 3
SGS++ + G ST A S S+G AS I ST ++ P SS+S G STQ P+S
Sbjct: 244 SGSSS-TYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSS 297
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -3
Query: 197 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 27
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 448 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 507
Query: 26 TQLIEPT 6
+ L P+
Sbjct: 508 STLTTPS 514
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 188 GLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPS--SSNSAGYSTQLI 15
G T + S+GS TFS + + SG + +ST +SP PS S +++G ST
Sbjct: 436 GSTASSPTGSTGS-TFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTS 494
Query: 14 EPT 6
EP+
Sbjct: 495 EPS 497
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.5 bits (68), Expect = 0.39
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 158 SGSATFSTGRSTSWAFSKSSGCAS-IGRSTITSP--FPSSSNSAGYSTQLIEPTS 3
SGS++ + G ST A S S+G AS I ST ++ P SS+S G STQ P+S
Sbjct: 451 SGSSS-TYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSS 504
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -3
Query: 197 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 27
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 655 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 714
Query: 26 TQLIEPT 6
+ L P+
Sbjct: 715 STLTTPS 721
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 188 GLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPS--SSNSAGYSTQLI 15
G T + S+GS TFS + + SG + +ST +SP PS S +++G ST
Sbjct: 643 GSTASSPTGSTGS-TFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTS 701
Query: 14 EPT 6
EP+
Sbjct: 702 EPS 704
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.5 bits (68), Expect = 0.39
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 158 SGSATFSTGRSTSWAFSKSSGCAS-IGRSTITSP--FPSSSNSAGYSTQLIEPTS 3
SGS++ + G ST A S S+G AS I ST ++ P SS+S G STQ P+S
Sbjct: 451 SGSSS-TYGSSTPSASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSS 504
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -3
Query: 182 TT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYST 24
+T G SSGS T +TG + + S SS S+ S SP PS+S S ST
Sbjct: 1221 STVRGSTSSGS-TVTTGSTEGSSTSGSSSATSLSSS---SPVPSTSQSPNPST 1269
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = -3
Query: 197 STMGLTT*TGLKSSGSATFSTG-RSTSWAFSKSSGCASI-GRSTITS-PFPSSSNSAGYS 27
ST + T +S+ + S G +ST+ + S SS S G ST+TS P PSS+ S+G
Sbjct: 655 STFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQ 714
Query: 26 TQLIEPT 6
+ L P+
Sbjct: 715 STLTTPS 721
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 194 TMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTI-TSPFPSSSNSAG 33
TMG ++ +G+ +S +++ STS S S AS + TS PSS+ + G
Sbjct: 1552 TMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG 1606
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 194 TMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTI-TSPFPSSSNSAG 33
TMG ++ +G+ +S +++ STS S S AS + TS PSS+ + G
Sbjct: 1635 TMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTTGLVSTSTVPSSTGTMG 1689
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 194 TMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTI-TSPFPSSSNSAG 33
TMG ++ +G+ +S +++ STS S S AS + TS PSS+ + G
Sbjct: 1874 TMGSSSTSGVSTSSASSTQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG 1928
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 188 GLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPS--SSNSAGYSTQLI 15
G T + S+GS TFS + + SG + +ST +SP PS S +++G ST
Sbjct: 643 GSTASSPTGSTGS-TFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTS 701
Query: 14 EPT 6
EP+
Sbjct: 702 EPS 704
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 58 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 116
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 58 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 116
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 30.7 bits (66), Expect = 0.68
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSW-AFSKSSGCASIGRSTITSPFPSSSNSAGYS--TQLIEPTS 3
+GLK S+T S+ + S+ S+SSG ++G STI++ S +S+ YS + L PTS
Sbjct: 192 SGLKPPSSSTTSSNNTNSFRPSSRSSGNNNVG-STISTSAKSLESSSTYSSISNLNRPTS 250
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.68
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 161 SSGSATFSTGRSTSWAFSKSSGCASIGRST 72
+SGS T ++G TS+ SS CAS R+T
Sbjct: 21 TSGSVTVTSGTCTSYIADSSSNCASWARTT 50
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -3
Query: 197 STMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYS 27
+T G T TG S GSA STG + + S ++G + G S+ +P P+S+ G S
Sbjct: 36 NTGGNTNTTGGFSFGSAQPSTGSTGLFGNSTATG-SMFGGSSAAAPAPASAGIFGNS 91
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -3
Query: 170 GLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 15
G +SG +T S+S + ++G S G ST+T+P SSS S STQ I
Sbjct: 831 GSSTSGQTAVTTQGSSSTQTNSNTG--STG-STVTNPPVSSSTSGSSSTQPI 879
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -3
Query: 170 GLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 15
G +SG+ +T S+S + ++G S G ST+T P SS SA STQ I
Sbjct: 887 GSSTSGTTVVTTQGSSSTQTNPNTG--STG-STVTQPSAFSSTSASSSTQPI 935
>AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.9 protein.
Length = 250
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 161 SSGSATFSTGRSTSWAFSKSSGCASIGRS 75
+SGS T ++G TS+ SS CAS R+
Sbjct: 198 ASGSVTVTSGTCTSYIADSSSNCASWSRN 226
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFP 54
+G SS S+ +S+ +ST +SS +GR T + P P
Sbjct: 37 SGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLP 76
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFP 54
+G SS S+ +S+ +ST +SS +GR T + P P
Sbjct: 259 SGQNSSRSSVYSSSKSTVIEVEQSSRQQQVGRPTESPPLP 298
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 132 KVNKLGFL*IFGLCLNR*INNNKSV--SIFVQFSRIFNPADR 13
K+ G + I C+N INNN+S+ S QF R NP D+
Sbjct: 14 KITIFGIITISVECVNSNINNNESLDYSSRRQFVRAVNPHDK 55
>Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical
protein C34B4.2a protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRST-SWAFSKSSGCASIGRSTITSPFPS 51
T SSG++T R+T + + SS C+S S+ +SP PS
Sbjct: 243 TKAASSGNSTAGPIRATFGYQSASSSECSSTSSSSASSPAPS 284
>Z68115-2|CAA92167.1| 914|Caenorhabditis elegans Hypothetical
protein F19H6.3 protein.
Length = 914
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 79 LPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPGKRYP 234
+P++ Q+ + N+ EPE V+ +P+++N + Y YP
Sbjct: 494 VPVDVVLSSFTLQQIPVVEASNIPEPEHAMNVRNSSPLLDNQSAPYNSFFYP 545
>AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical
protein Y25C1A.3 protein.
Length = 605
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 173 TGLKSSGSATFSTGRSTSWAFSKSSGC-ASIGRSTITSPFPSSSNSAGY 30
T ++G +T ST S A + + G AS G + +SP P+++ GY
Sbjct: 331 TASTAAGGSTASTAAGGSTATTAAGGSTASTGVTVASSPAPAAACEPGY 379
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 76 DLP-IEAQPEDL--EKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPGK-RYPDAT 243
D P + A+P D +KA P + A+P DLSP + + PI N+Q P + P
Sbjct: 927 DAPKVAAKPRDPSPKKAVPEKEPAKVAAKPRDLSPKKAI-PIPANTQEAPPTPVKNPVKK 985
Query: 244 WR 249
W+
Sbjct: 986 WK 987
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,908,005
Number of Sequences: 27780
Number of extensions: 209530
Number of successful extensions: 690
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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