Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0913
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.44 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.44 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   0.77 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.5  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 467 DENYIPPEILPKRRNTLL 520
           D NYI PE+ P   N ++
Sbjct: 446 DPNYISPEVFPNTNNAIM 463


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 467 DENYIPPEILPKRRNTLL 520
           D NYI PE+ P   N ++
Sbjct: 394 DPNYISPEVFPNTNNAIM 411


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 548 YISFIECNVLIMYFVVWVRFLVVYSFHLLLLKPFSLF-AFY 429
           ++++I C +L++Y++    +    S ++   KPF  F +FY
Sbjct: 2   FLAYIACFLLLLYYIYSKHYSYWQSKNVPTDKPFLFFGSFY 42


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/46 (17%), Positives = 23/46 (50%)
 Frame = -2

Query: 545 ISFIECNVLIMYFVVWVRFLVVYSFHLLLLKPFSLFAFYLQVFLYL 408
           +SF  C +    F++W+  +     + L ++ +    ++ ++ +YL
Sbjct: 297 LSFFLCLIPFRVFILWIILVPEEQVYHLEIEKYYNILYFCRIMVYL 342


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 506 VVWVRFLVVYSFHLLLLKPFSLFAFYLQV 420
           V + RFL VY  +LL+      F F+++V
Sbjct: 168 VFFKRFLPVYVSYLLIFVQQIPFCFFVRV 196


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = -2

Query: 512 YFVVWVRF---LVVYSFHLLLLKPFSLFAFYLQVFLY 411
           YF V + F    ++++ H LL   +  +AF + + +Y
Sbjct: 78  YFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVY 114


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 478 IVFIYCC*NLF 446
           +V++YCC N F
Sbjct: 157 LVYVYCCDNNF 167


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 518 IMYFVVWVRFLVVYSFHLLLLKPFSL 441
           + YFV+++   +V+      L PF L
Sbjct: 43  VAYFVIFIILTIVFFEKRSALSPFEL 68


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 474 TIYHQKSYPNDE 509
           TIYHQ+++ N E
Sbjct: 222 TIYHQENFENYE 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,430
Number of Sequences: 336
Number of extensions: 1903
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)