Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0913
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128445-1|AAM75038.1|  406|Drosophila melanogaster LD24471p pro...    38   0.009
AE013599-3714|AAF47086.1|  406|Drosophila melanogaster CG4882-PA...    38   0.009
AB010265-1|BAA32693.1|  406|Drosophila melanogaster protein ( Dr...    38   0.009
AB010261-2|BAA32685.1|  406|Drosophila melanogaster protein ( Dr...    38   0.009
AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p pro...    29   4.2  
AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-P...    29   4.2  
AE014296-744|AAF47827.2|  505|Drosophila melanogaster CG11593-PA...    28   7.4  

>AY128445-1|AAM75038.1|  406|Drosophila melanogaster LD24471p
           protein.
          Length = 406

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 368 WFFENEEKIDLQIEDKEKLVDKTQ-TKKKVLTAIDENYIPPEI 493
           WFFEN + ID+QI  K+    K    KKK   A D  Y+PP I
Sbjct: 360 WFFENRDDIDIQIYKKKVYYPKRWFGKKKKPKAADTFYVPPTI 402


>AE013599-3714|AAF47086.1|  406|Drosophila melanogaster CG4882-PA
           protein.
          Length = 406

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 368 WFFENEEKIDLQIEDKEKLVDKTQ-TKKKVLTAIDENYIPPEI 493
           WFFEN + ID+QI  K+    K    KKK   A D  Y+PP I
Sbjct: 360 WFFENRDDIDIQIYKKKVYYPKRWFGKKKKPKAADTFYVPPTI 402


>AB010265-1|BAA32693.1|  406|Drosophila melanogaster protein (
           Drosophila melanogastermRNA at 60A locus in chromosome
           2R, complete cds. ).
          Length = 406

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 368 WFFENEEKIDLQIEDKEKLVDKTQ-TKKKVLTAIDENYIPPEI 493
           WFFEN + ID+QI  K+    K    KKK   A D  Y+PP I
Sbjct: 360 WFFENRDDIDIQIYKKKVYYPKRWFGKKKKPKAADTFYVPPTI 402


>AB010261-2|BAA32685.1|  406|Drosophila melanogaster protein (
           Drosophila melanogastergenes at 60A locus in chromosome
           2R. ).
          Length = 406

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +2

Query: 368 WFFENEEKIDLQIEDKEKLVDKTQ-TKKKVLTAIDENYIPPEI 493
           WFFEN + ID+QI  K+    K    KKK   A D  Y+PP I
Sbjct: 360 WFFENRDDIDIQIYKKKVYYPKRWFGKKKKPKAADTFYVPPTI 402


>AY118499-1|AAM49868.1|  231|Drosophila melanogaster LD08826p
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -3

Query: 286 LLFKFQLPCFFQRINNSFCAATSFSWVLLIAFSILSVKDACKEGFVGIISIFASKDIHFS 107
           +LFK++ P F+Q + N F       W  L  F+  ++KDA      G   +   + I+  
Sbjct: 62  ILFKYENPRFYQML-NFFGVCQFVFWTYLSHFAFTTLKDAPVVEKPG-EELKWFQRINLG 119

Query: 106 NTSFFSGSTLCSSL 65
           +  + +G T CS L
Sbjct: 120 DNKYRNGITACSFL 133


>AE013599-1170|AAF58754.1|  231|Drosophila melanogaster CG12935-PA
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -3

Query: 286 LLFKFQLPCFFQRINNSFCAATSFSWVLLIAFSILSVKDACKEGFVGIISIFASKDIHFS 107
           +LFK++ P F+Q + N F       W  L  F+  ++KDA      G   +   + I+  
Sbjct: 62  ILFKYENPRFYQML-NFFGVCQFVFWTYLSHFAFTTLKDAPVVEKPG-EELKWFQRINLG 119

Query: 106 NTSFFSGSTLCSSL 65
           +  + +G T CS L
Sbjct: 120 DNKYRNGITACSFL 133


>AE014296-744|AAF47827.2|  505|Drosophila melanogaster CG11593-PA
           protein.
          Length = 505

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 386 EKIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEILP 499
           EK  L++E  ++  DK + + K  +A+D   + PE+LP
Sbjct: 63  EKNILKLEQAKQDHDKEELEFKTTSALDNRILRPELLP 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,484,126
Number of Sequences: 53049
Number of extensions: 275932
Number of successful extensions: 959
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)