Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0909
         (710 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n...    36   0.98 
UniRef50_UPI0000546B52 Cluster: PREDICTED: hypothetical protein ...    36   0.98 
UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;...    34   4.0  
UniRef50_Q97MS1 Cluster: Membrane-associated methyl-accepting ch...    33   5.2  
UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genom...    33   5.2  
UniRef50_UPI0000DA30B0 Cluster: PREDICTED: hypothetical protein;...    33   6.9  
UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2; Desulf...    33   6.9  
UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1...    33   9.2  
UniRef50_UPI0000F1D904 Cluster: PREDICTED: similar to LOC494811 ...    33   9.2  
UniRef50_Q9FMN2 Cluster: Gb|AAF23287.1; n=1; Arabidopsis thalian...    33   9.2  

>UniRef50_UPI00015B932D Cluster: UPI00015B932D related cluster; n=1;
           unknown|Rep: UPI00015B932D UniRef100 entry - unknown
          Length = 1018

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +1

Query: 277 HLRRVSYVGTRLNLVLAVPRVSA-SVGSAEGEIR 375
           HLRR++YVG R+N + A P  SA  VG+ +G IR
Sbjct: 355 HLRRITYVGARVNALAAGPGGSAVFVGAEDGSIR 388


>UniRef50_UPI0000546B52 Cluster: PREDICTED: hypothetical protein
           isoform 7; n=5; Danio rerio|Rep: PREDICTED: hypothetical
           protein isoform 7 - Danio rerio
          Length = 807

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 26/73 (35%), Positives = 36/73 (49%)
 Frame = -3

Query: 453 GSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*VESGADVADTTQMQ 274
           GS  +   V K  S  S R Q    + D   SG+      GN+ +   SG D + +T +Q
Sbjct: 63  GSSGILMTVEKTGSDSSSRSQLQDSDVDSVGSGSLAYGTVGNAVEIGMSGYDASASTDVQ 122

Query: 273 GAEVISLTSVTRP 235
           G+EVIS +SV  P
Sbjct: 123 GSEVISSSSVLMP 135


>UniRef50_Q7WZL7 Cluster: Putative mating pair formation protein;
           n=1; Stenotrophomonas maltophilia|Rep: Putative mating
           pair formation protein - Xanthomonas maltophilia
           (Pseudomonas maltophilia) (Stenotrophomonasmaltophilia)
          Length = 560

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = -3

Query: 459 GDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGT--D*C*NSGNSQD*VESGADVADT 286
           G+G+G+  N++ +G   G   P DAA++++   +G   D    SG+  D  ESG D    
Sbjct: 362 GEGAGTALNELGEGVGRGGAAPGDAADSSEGGGAGDVGDSASESGDGGDGQESGEDEGGP 421

Query: 285 TQMQGAEVISLTSV 244
           +     E  S T V
Sbjct: 422 SAANDEEYNSGTDV 435


>UniRef50_Q97MS1 Cluster: Membrane-associated methyl-accepting
           chemotaxis protein with HAMP domain; n=2;
           Clostridium|Rep: Membrane-associated methyl-accepting
           chemotaxis protein with HAMP domain - Clostridium
           acetobutylicum
          Length = 555

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +1

Query: 442 ATASVSLADNIIVSDIGAAITIAMSNLTSKSISSDAK 552
           ATA  S+ + II+  +GA + +AM+ LTS+SI +  K
Sbjct: 184 ATAKTSIIETIILVILGAGLGVAMAVLTSRSIGNPMK 220


>UniRef50_A7NX26 Cluster: Chromosome chr5 scaffold_2, whole genome
           shotgun sequence; n=3; core eudicotyledons|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 679

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 200 SRSQRSRHGGEDQPLSTIHRFH*TSL--RSRCQGCAEN*ARNRHRDVA 63
           SR  R + GG D+ L+  + F    L  + RCQ C EN  R RH  VA
Sbjct: 426 SRKTRKKEGGNDRKLTEKNNFANRILTQQERCQFCFENPTRPRHLVVA 473


>UniRef50_UPI0000DA30B0 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 206

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 524 PPNQSLRTRSWTSRQ-QLPREDPCLPDGLRSRGQPCSR 634
           PP + +R  +  SR+ + PRE  CL  GLR RG+P +R
Sbjct: 87  PPQKGVRAFAARSRRPRPPREKECLGLGLRPRGRPSAR 124


>UniRef50_A1VA79 Cluster: Radical SAM domain protein; n=2;
           Desulfovibrio vulgaris subsp. vulgaris|Rep: Radical SAM
           domain protein - Desulfovibrio vulgaris subsp. vulgaris
           (strain DP4)
          Length = 364

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = -1

Query: 452 EAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLS 309
           E +A  T F R   P+  D+ T  +    P A P D ETL   RT LS
Sbjct: 186 ENLALLTDFVRELAPDRVDVTTLSRPGTWPGARPADRETLAAWRTALS 233


>UniRef50_UPI00015B5672 Cluster: PREDICTED: similar to RACK7; n=1;
            Nasonia vitripennis|Rep: PREDICTED: similar to RACK7 -
            Nasonia vitripennis
          Length = 1098

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 22/65 (33%), Positives = 30/65 (46%)
 Frame = -1

Query: 497  AAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTART 318
            A P S +   S   T+A ASA       PP++ DLR+       P A P  A+   T+R 
Sbjct: 850  ATPPSSSSSSSYPLTKAAASANDAMVYIPPQSNDLRSSAYELPPPEAGPATAQIHNTSRD 909

Query: 317  KLSRV 303
              +RV
Sbjct: 910  LANRV 914


>UniRef50_UPI0000F1D904 Cluster: PREDICTED: similar to LOC494811
           protein; n=4; Danio rerio|Rep: PREDICTED: similar to
           LOC494811 protein - Danio rerio
          Length = 841

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -2

Query: 229 VNDV*CTRRAPGAS--VAVTAERISRSQQF-TDFIEQV*DHDVKDALRIRLEID--IAMW 65
           V D   +RR P ++  V V   R+ +  +  TDF  +    D+ DA R+R E++  I  W
Sbjct: 691 VTDTHLSRRTPESNRQVVVICTRVDKGNKIITDFTAEPAPEDITDASRLRHEVENLIRQW 750

Query: 64  HS 59
           H+
Sbjct: 751 HN 752


>UniRef50_Q9FMN2 Cluster: Gb|AAF23287.1; n=1; Arabidopsis
           thaliana|Rep: Gb|AAF23287.1 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 930

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 29/92 (31%), Positives = 37/92 (40%)
 Frame = -3

Query: 504 SYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNS 325
           S   S V D + +   D   S  +      +SG    Q   E   FSFS  D C   GNS
Sbjct: 353 SSTGSPVQDENKITIKDMHISAGDFEKSQSASGESILQPEIEEEQFSFSDLDECKPGGNS 412

Query: 324 QD*VESGADVADTTQMQGAEVISLTSVTRPEK 229
                 G+  +DT ++ G E    T  T PEK
Sbjct: 413 ----SVGSSSSDTVKVDGKESYDETK-TSPEK 439


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,932,134
Number of Sequences: 1657284
Number of extensions: 12040408
Number of successful extensions: 38683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38651
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)