Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0909
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 32 0.40
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09) 29 4.9
SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 6.5
SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 28 6.5
SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 6.5
SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7) 28 6.5
SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 28 6.5
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 28 6.5
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 28 6.5
SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32) 28 6.5
SB_41051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5) 28 8.6
>SB_22293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1239
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 101 RILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASDIIN-FSGRVTDVRLMTSAPC 277
RI +I+ F IG +LR + R GS+ I++ + GR+T+V TS C
Sbjct: 863 RITEILYRTSFTCIGVVLRRSFTAHRSPVLGSYYGGPLPHIVHLYWGRITEVPYRTSFTC 922
Query: 278 ICVV 289
I VV
Sbjct: 923 IGVV 926
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 489 DVTDNDVVCEGDGSGSLS-NDVLKGKSSGSERPQDAAENADFSFSGTD*C*NSGNSQD*V 313
DV+D D V +GD G+ + +DV G S G + +++ D S +G + N N D V
Sbjct: 166 DVSDGDDVSDGDVDGANNCDDVSNGASDGDDVSNGSSDGDDVS-NGANDVSNGANDGDDV 224
Query: 312 ESGADVAD 289
+ A+ D
Sbjct: 225 SNVANDGD 232
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 89 PNSQRILDIVISN--LFNEIGELLRAADPLRRDGY 187
P SQRIL +++ LFN+ L AA+ L R GY
Sbjct: 3158 PGSQRILVVIMGGPQLFNQKRPLSTAAEQLHRHGY 3192
>SB_36243| Best HMM Match : 7tm_2 (HMM E-Value=2.2e-09)
Length = 1338
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 513 HRNSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTD*C 343
HRN + TD+ VC+ G G L+N + + G R + E+ F F+ + C
Sbjct: 56 HRNQSPTETWTDDLPVCKISGVGFLTNQ--RYREDGGRREEHEFEDRSFHFNVDNTC 110
>SB_56858| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 100
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 32 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 86
>SB_52167| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 287
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 219 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 273
>SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 191 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 245
>SB_35595| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 214
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 146 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 200
>SB_34667| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 172 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 226
>SB_32994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 594 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 648
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1145 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1199
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1201 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1255
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 1204 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 1258
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 607 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 661
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 780 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 834
>SB_31412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 909
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 14 TMKAFIFALALACVSAVPHRDVDFEPNSQRILDIVISNLF 133
T ++ A++ AC A+ H+D D+ P+ I+ +IS +F
Sbjct: 831 TERSVFSAMSTACKQAIFHQDHDYYPSIFIIIIAIISLIF 870
>SB_769| Best HMM Match : Retrotrans_gag (HMM E-Value=0.32)
Length = 500
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 524 PPNQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRVRRPTRHQQITVNYSNDT 688
PP + + T++ C+PD QP RRPTR + Y +T
Sbjct: 432 PPAEPVAETPPTTQANNDPVSSCMPDASSQAPQPLPEPRRPTRARTRPKRYEPET 486
>SB_41051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 497 Q*LLRCQI*PP---NQSLRTRSWTSRQQLPREDPCLPDGLRSRGQPCSRV 637
Q LRCQ+ P N SL + S R DPC+ SRG C R+
Sbjct: 85 QGFLRCQLLPTDMFNSSLAANA--SFSHYSRADPCVVHPCPSRGGQCERL 132
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 507 NSYCSSDVTDNDV-VCEGDGSGSLSNDVLKGKSSGSERPQDAA 382
+S+ + TD D + +G+GSGS N + G +GS +++A
Sbjct: 697 DSHTPKEFTDTDAKLLQGEGSGSQHNVMRGGSGAGSGNLKESA 739
>SB_38461| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=6.5)
Length = 207
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 313 NLVLAVPRVSASVG-SAEGEIRIFSRVLRSFASGGLALENVVAEATASVSLADNIIVSDI 489
N+ + R +AS G + EIR+ + + GGLAL + AT L ++VS +
Sbjct: 12 NISASRNRHTASFGHGGDKEIRVQYAEIVAAVLGGLALAWIADLATGRRGLGATVLVSGV 71
Query: 490 GAA 498
G A
Sbjct: 72 GLA 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,924,963
Number of Sequences: 59808
Number of extensions: 396954
Number of successful extensions: 1229
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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