Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0907
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        24   4.9  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        24   4.9  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        24   4.9  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        24   4.9  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.9  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   6.5  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   6.5  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 17  VCNAKIDCCPCVQHAFDVDPCQ 82
           +C++  DC  C  H  +  PCQ
Sbjct: 68  LCSSYEDCIRCAVHEINNIPCQ 89


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 17  VCNAKIDCCPCVQHAFDVDPCQ 82
           +C++  DC  C  H  +  PCQ
Sbjct: 68  LCSSYEDCIRCAVHEINNIPCQ 89


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 17  VCNAKIDCCPCVQHAFDVDPCQ 82
           +C++  DC  C  H  +  PCQ
Sbjct: 68  LCSSYEDCIRCAVHEINNIPCQ 89


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 17  VCNAKIDCCPCVQHAFDVDPCQ 82
           +C++  DC  C  H  +  PCQ
Sbjct: 68  LCSSYEDCIRCAVHEINNIPCQ 89


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 17  VCNAKIDCCPCVQHAFDVDPCQ 82
           +C++  DC  C  H  +  PCQ
Sbjct: 644 LCSSYEDCIRCAVHEINNIPCQ 665


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 605 NETSAIDETGGPAAPST 555
           N+ S    TGG AAPST
Sbjct: 181 NQCSLTGSTGGQAAPST 197


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 605 NETSAIDETGGPAAPST 555
           N+ S    TGG AAPST
Sbjct: 181 NQCSLTGSTGGQAAPST 197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,931
Number of Sequences: 2352
Number of extensions: 10161
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)